Ibrahim L L - OmicsDI

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Transcriptomics (55)
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biostudies-arrayexpress (60)
pride (13)
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Instrument Platform

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2013 (12)
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UNIPROT ID/AC

Q12834 (2)
Q13257 (2)
Q9Y6D9 (2)
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O60566 (1)
P38987 (1)
P47113 (1)

CHEBI ID

CHEBI:27266 (5)
CHEBI:24898 (4)
CHEBI:25017 (4)
CHEBI:32816 (4)
CHEBI:15318 (3)
CHEBI:15428 (3)
CHEBI:16335 (3)
CHEBI:16449 (3)
CHEBI:16704 (3)
CHEBI:16708 (3)
CHEBI:16797 (3)
CHEBI:16811 (3)
CHEBI:16958 (3)
CHEBI:17154 (3)
CHEBI:17368 (3)
CHEBI:17596 (3)
CHEBI:17750 (3)
CHEBI:18237 (3)
CHEBI:26271 (3)
CHEBI:26806 (3)
CHEBI:27897 (3)
CHEBI:28044 (3)
CHEBI:28300 (3)
CHEBI:30769 (3)
CHEBI:78320 (3)
CHEBI:7916 (3)
CHEBI:15346 (2)
CHEBI:15354 (2)
CHEBI:15996 (1)
CHEBI:17552 (1)

Metabolite Name

Isoleucine (3)
Leucine (3)
Valine (3)
Xanthine (3)
2-Hydroxybutyric acid (2)
2-aminoadipate (2)
3-phosphoglycerate (2)
3-ureidopropionate (2)
6-phosphogluconate (2)
AMP (2)
Acetylcarnitine (2)
Adenine (2)
Adenosine (2)
CMP (2)
GMP (2)
Glucose 6-phosphate (2)
Glucuronic acid (2)
Inosine (2)
Isoleucine (2)
Leucine (2)
Methionine (2)
N-Acetylglutamic acid (2)
N-acetylglutamate (2)
Pantothenic acid (2)
Phenylalanine (2)
Proline (2)
Pyridoxine (2)
Taurocholic acid (2)
Tryptophan (2)
UMP (2)

IsPrivate

False (3)

Modelling Approach

Ordinary differential equation model (3)

Study type

Transcription profiling by array (39)
RNA-seq of coding RNA (11)
ChIP-seq (2)
DNA-seq (2)
Unknown experiment type (1)
CLIP-Seq (1)
Cell line - High-throughput sequencing (1)
Antigen profiling (1)
Transcription profiling by RT-PCR (1)
Other (1)

Release Date

2023 (238)
2022 (231)
2025 (224)
2021 (201)
2024 (197)
2020 (108)
2019 (76)
2016 (62)
2018 (61)
2017 (48)
2015 (45)
2014 (38)
2026 (35)
2013 (30)
2012 (28)
2011 (25)
2010 (15)
2009 (11)
2007 (5)
2008 (3)
2003 (1)

Lab affiliation

CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences Lazarettgasse 14, AKH BT 25.3 1090 Vienna, Austria (1)
Centre for Proteomic Research, University of Southampton (1)
Chemical & Biomolecular Engineering, Johns Hopkins University (1)
Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota, USA (1)
EDyP (1)
Molecular Systems Biology (MoSys), Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria (1)
Professor of Molecular Biology, Centre for Gene Regulation and Expression, Life Sciences Research Complex, University of Dundee, Dundee, DD1 5EH (1)
Professor of Molecular Biology, University of Dundee (1)
Science for Life Laboratory, Department of Protein Science, CBH, KTH Royal Institute of Technology, SE-171 21 Stockholm, Sweden (1)
Tomoko Takano, Dr. Professor - Department of Medicine, Division of Experimental Medicine, McGill University, MOntreal, QC, Canada (1)
University of Dundee (1)
University of Leicester (1)
teaching assiatant, faculty of pharmacy, October 6 university, Cairo, Egypt (1)

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The effects of oligomycin administration and glutamine deprivation on metabolic profile of MCF7 breast cancer cell line measured using [1,2-13C2]-D-glucose and [U-13C5]-L-glutamine as tracers

This study aims to establish a comprehensive, genome-scale metabolic model (GSMM) combining different omics data of different regulatory levels of breast cancer cells in order to elucidate the way that these regulatory levels affect or determine each other. Together with transcriptomics, proteomics ...

2021-01-18 | MTBLS183 | MetaboLights

Lactiplantibacillus plantarum cell free supernatant

The proteomic approach provided new insights into the mechanisms of action of L. plantarum CFS.

ORGANISM(S): Lactobacillus plantarum

2026-06-30 | PXD064835 | Pride

L. plantarum Cfs

Ibrahim2008_MCC_assembly_model_KDM

BioSystems (2007), doi:10.1016/j.biosystems.2008.06.007 In-silico study of kinetochore control, amplification, and inhibition effects in MCC assembly Bashar Ibrahim, Eberhard Schmitt, Peter Dittrich, Stephan Diekmann This is the kine...

2024-09-02 | BIOMD0000000193 | BioModels

Comparison of Leishmania killicki (syn. L. tropica) and Leishmania tropica Population Structure in Maghreb by Microsatellite Typing.

Not available

S-EPMC4672892 | biostudies-literature

Distinguishing d- and l-aspartic and isoaspartic acids in amyloid β peptides with ultrahigh resolution ion mobility spectrometry.

Not available

S-EPMC5555368 | biostudies-literature

Ibrahim2008_Cdc20_Sequestring_Template_Model

Biophysical Chemistry 134 (2008) 93-100 Mad2 binding is not sufficient for complete Cdc20 sequestering in mitotic transition control (an in silico study) Bashar Ibrahim, Peter Dittrich, Stephan Diekmann, Eberhard Schmitt This mode...

2024-09-02 | BIOMD0000000194 | BioModels

Positive impact of sodium L-lactate supplementation on blood acid-base status in preterm newborns.

Not available

S-EPMC12454137 | biostudies-literature

Diversity and biological activity of culturable endophytic bacteria associated with marigold (Calendula officinalis L.).

Not available

S-EPMC8500798 | biostudies-literature

Access to Water, Sanitation, and Hygiene (WASH) practices and their associations with waterborne diseases and malnutrition in Ibrahim Kodbuur District, Hargeisa, Somaliland: a cross-sectional study.

Not available

S-EPMC12838488 | biostudies-literature

Phytochemical analysis and neuroprotective potential of Achillea santolina L. fractions.

Not available