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GenomicsKaiso is a novel TAZ-interaction partner that promotes hepatic stellate cell activation and regulates the downstream lncRNA HIF1A-AS3
Kaiso is a novel TAZ-interaction partner that promotes hepatic stellate cell activation and regulates the downstream lncRNA HIF1A-AS3
PRJNA1519744 | ENA
ProteomicsRegulation of the HTRA2 protease activity by PDZ domain-binding peptide ligands and the influence on HTRA2-specific protein interaction networks in retinal tissues
For the identification of HTRA2-specific protein interaction partners in retinal tissues of the house swine (Sus scrofa), we performed co-immunoprecipitation experiments with recombinant 6His-tag HTRA2 followed by quantitative LC-MS-based proteomics (see Fig. 2A and File S1). In brief, 2 µg recombin...
ORGANISM(S): Homo sapiens (Human) Sus scrofa domesticus (domestic pig) 
2021-10-11 | PXD024442 | Pride
Htra2  neuroprotection  retina  interaction partners  co-immunoprecipitation  mass spectrometry 
GenomicsThe Islet-1 Interaction Partner Rnf20 Regulates Glucose Homeostasis and Pancreatic β-cell Identity.
The Islet-1 Interaction Partner Rnf20 Regulates Glucose Homeostasis and Pancreatic β-cell Identity.
PRJNA1181900 | ENA
TranscriptomicsHost-specific transcriptomic pattern of Trichoderma virens during interaction with maize or tomato roots
To test the hypothesis that gene expression by the fungal partner in this beneficial interaction is modulated by the plant host, Trichoderma virens was co-cultured with maize or tomato in a hydroponic system allowing interaction with the roots. The transcriptomes for T. virens alone were compared wi...
ORGANISM(S): Trichoderma virens 
2014-12-19 | E-GEOD-64344 | biostudies-arrayexpress
UnknownOpen conformation of tetraspanins shapes interaction partner networks on cell membranes.
Not available
S-EPMC7507038 | biostudies-literature
UnknownInteraction with a reactive partner improves learning in contrast to passive guidance.
Not available
S-EPMC9499977 | biostudies-literature
TranscriptomicsListening in on a bacterial/fungal dialog: transcriptional profiling of an antagonistic interaction
The genus Collimonas consists of soil bacteria that are well known for their antifungal activity and for mycophagy, i.e. the ability to grow at the expense of living fungi. The aim of the current study was to gain a better understanding of the mechanisms of antagonism of Collimonas bacteria towards ...
ORGANISM(S): Collimonas fungivorans 
2011-06-20 | E-MTAB-350 | biostudies-arrayexpress
ProteomicsIdentification of Candidate Interaction Partners of Human Calpain-5 in Neuroblastoma Cells with SWATH-MS Analysis
Few interaction partners of human calpain-5/CAPN5 have been identified or proposed. This project was designed to identify candidate interaction partners of CAPN5 in SH-SY5Y neuroblastoma cells. We utilized sequential window acquisition of all theoretical mass spectra (SWATH‐MS) for proteomic analysi...
ORGANISM(S): Homo sapiens (Human) 
2026-02-02 | PXD068008 | Pride
Human Capn5 Neuroblastoma Proteomics Calpain-5 Interaction partner Mass spectrometry Immunoprecipitation 
ProteomicsAkt2 partners L6 myoblasts - Novel Endogenous, Insulin-Stimulated Akt2 Protein Interaction Partners in L6 Myoblasts
Insulin resistance and Type 2 diabetes are marked by an aberrant response in the insulin signaling network. The phosphoinositide-dependent serine/threonine kinase, Akt2, plays a key role in insulin signaling and glucose uptake, most notably within skeletal muscle. Protein-protein interaction regul...
ORGANISM(S): Rattus norvegicus (Rat) 
2015-09-30 | PXD002557 | Pride
Akt2 Hplc-esi-ms/ms Rock2 
TranscriptomicsKaiso is a novel TAZ-interaction partner that promotes hepatic stellate cell activation and regulates the downstream lncRNA HIF1A-AS3
Yes-associated protein (YAP) and transcriptional coactivator with PDZ-binding motif (TAZ), are key regulators of hepatic stellate cell (HSC) activation and liver fibrosis. While the canonical YAP/TAZ-TEAD axis is well-characterized, non-canonical interaction partners and downstream long non-coding R...
ORGANISM(S): Homo sapiens 
2026-09-14 | GSE345280 | GEO
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