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TranscriptomicsExpression quantitative trait loci (eQTL) analysis of mouse lung tumors
To detect genetic variations affecting gene expression in mouse lung tumor tissue, we carried out a genetic linkage study on the transcriptome of lung tumors induced by urethane in an (A/J x C57BL/6)F4 intercross population, whose individual lung tumor multiplicity (Nlung) is linked to the genotype ...
ORGANISM(S): Mus musculus 
2016-03-14 | E-GEOD-71232 | biostudies-arrayexpress
ProteomicsAptamer Affinity Mass Spectrometry
Antibody-based affinity purification of macromolecular complexes has revolutionized the study of protein-protein interactions. Here, we present AptA-MS (Aptamer Affinity – Mass Spectrometry), a robust strategy using a specific, high-affinity RNA aptamer against GFP to identify novel interactors of a...
ORGANISM(S): Homo sapiens (Human) 
2020-06-17 | PXD015620 | Pride
Hct116 Aptamer Rna aptamer Heat shock factor S2 
TranscriptomicsExpression of Cyclic AMP associated genes on primary culture human myometrial cells
During pregnancy, the myometrium remains quiescent but at term, switches to a state capable of producing a series of coordinated contractions for the delivery of the fetus. Myometrial contractions of labour signify the normal physiological end-point of pregnancy but the biochemical onset of labour m...
ORGANISM(S): Homo sapiens 
2016-07-01 | E-GEOD-75799 | biostudies-arrayexpress
ProteomicsAsian citrus psyllid hemolymph LC-MS/MS
Citrus greening disease, also known as Huanglongbing (HLB), is the most serious disease of citrus plants. It is associated with the Gram-negative bacterium ‘Candidatus Liberibacter asiaticus’ (CLas), which is transmitted between host plants by the hemipteran insect vector Diaphorina citri in a circu...
ORGANISM(S): Diaphorina citri (Asian citrus psyllid) 
2018-08-16 | PXD009257 | Pride
Hemolymph Vitellogenin Diaphorina citri Citrus Psyllid Candidatus liberibacter asiaticus Lc-ms/ms 
ModelsCooper2015 - Modeling the effects of systemic mediators on the inflammatory phase of wound healing
This is an ordinary differential equation-based mathematical model describing the inflammatory phase of the wound healing response. The model describes the interactions in the wound between wound debris, pathogens, neutrophils and macrophages, as well as the modulation of these interactions by estro...
2024-09-02 | BIOMD0000000855 | BioModels
ProteomicsAsian citrus psyllid gut LC-MSMS
Huanglongbing, or citrus greening disease, has devastated the citrus industry. It is associated with the gram negative bacterium Candidatus Liberibacter asiaticus (CLas) that can be transmitted by Diaphorina citri, the Asian citrus psyllid. For transmission to occur, CLas must cross the gut of the A...
ORGANISM(S): Diaphorina citri (Asian citrus psyllid) 
2018-10-26 | PXD005419 | Pride
Lc-msms Wolbachia Gut Diaphorina citri Citrus Psyllid Candidatus liberibacter asiaticus Acp 
MetabolomicsFaecal microbiota transplant from aged donor mice affects spatial learning and memory via modulating hippocampal synaptic plasticity- and neurotransmission-related proteins in young recipients

BACKGROUND: The gut-brain axis and the intestinal microbiota are emerging as key players in health and disease. Shifts in intestinal microbiota composition affect a variety of systems, however, evidence of their direct impact on cognitive functions is still lacking. We tested whe...

2021-12-17 | MTBLS1437 | MetaboLights
ProteomicsDcitri - Hemolymph, spectral count (Kruseetal,jproteomeres2018)
abundance based on spectral count, Interaction consistency score: 0.3, Coverage: 2
ORGANISM(S): 121845 
2018-00-00 | 3925505146 | PAXDB
ProteomicsDcitri - Whole organism, Normalized peptide spectral count numbers (Ramseyetal,plosone2015)
abundance based on Normalized peptide spectral count numbers, Interaction consistency score: 2.4, Coverage: 3
ORGANISM(S): 121845 
2015-00-00 | 3479534116 | PAXDB
ProteomicsDcitri - Whole organism, Normalized peptide spectral count numbers (Ramseyetal,plosone2015)
abundance based on Normalized peptide spectral count numbers, Interaction consistency score: 2.2, Coverage: 3
ORGANISM(S): 121845 
2015-00-00 | 2717572991 | PAXDB
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