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ProteomicsATAD5-BAZ1B interaction modulates PCNA ubiquitination during DNA repair
Mono-ubiquitinated PCNA (mono-Ub-PCNA) is generated when replication forks stall and facilitates the DNA lesion bypass process. After resolving a replication stall, Ub-PCNA needs to be de-ubiquitinated to resume high-fidelity DNA synthesis. ATAD5 cooperates with UAF1-USP1 to de-ubiquitinate mono-Ub-...
ORGANISM(S): Homo sapiens (Human) 
2025-05-06 | PXD050108 | Pride
Baz1b De-ubiquitination Dna repair Usp1 Smarca5 Atad5 Baz1b Uaf1 Pcna 
UnknownAssessment of a Takagi-Sugeno-Kang fuzzy model assembly for examination of polyphasic loglinear allometry.
Not available
S-EPMC6951296 | biostudies-literature
TranscriptomicsDefault DNA Methylation is Preceded by Broad, Low-Level Transcription in Fetal Male Germ Cells and Is Inversely Patterned by Dynamic H3K4 Methylation (ChIP-chip and MIRA-chip)
To understand what dictates the emerging patterns of de novo DNA methylation, we mapped DNA methylation, chromatin, and transcription changes in purified fetal mouse germ cells using MIRA-chip, ChIP-chip, and strand-specific RNA-seq, respectively. De novo methylation occurred without any apparent tr...
ORGANISM(S): Mus musculus 
2013-07-31 | E-GEOD-45836 | biostudies-arrayexpress
TranscriptomicsDefault DNA Methylation is Preceded by Broad, Low-Level Transcription in Fetal Male Germ Cells and Is Inversely Patterned by Dynamic H3K4 Methylation (RNA-Seq)
To understand what dictates the emerging patterns of de novo DNA methylation, we mapped DNA methylation, chromatin, and transcription changes in purified fetal mouse germ cells using MIRA-chip, ChIP-chip, and strand-specific RNA-seq, respectively. De novo methylation occurred without any apparent tr...
ORGANISM(S): Mus musculus 
2013-07-31 | E-GEOD-46953 | biostudies-arrayexpress
UnknownConsistency and Stability of Motor Subtype Classifications in Patients With de novo Parkinson's Disease.
Not available
S-EPMC7957002 | biostudies-literature
Proteomicslabel-free quantitative proteomics analysis proteins in the intestinal tissue of Haemaphysalis qinghaiensis
De novo assembled transcriptomics-assisted label-free quantitative proteomics analysis reveals sex-specific proteins in the intestinal tissue of Haemaphysalis qinghaiensis
ORGANISM(S): Haemaphysalis Sp. Cj-2015 
2021-10-14 | PXD029123 |
TranscriptomicsComprehensive transcriptomic dataset for early stage fruit development in woodland strawberry Fragaria vesca
Fragaria vesca, a diploid woodland strawberry with a small and sequenced genome, is an excellent model for studying fruit development. The strawberry fruit is unique in that the edible flesh is actually enlarged receptacle tissue. The true fruit are the numerous dry achenes dotting the receptacleM-^...
ORGANISM(S): Fragaria vesca 
2013-10-01 | E-MTAB-1902 | biostudies-arrayexpress
UnknownDe novo designed ice-binding proteins from twist-constrained helices.
Not available
S-EPMC10319034 | biostudies-literature
UnknownPrognostic models for locally advanced cervical cancer: external validation of the published models.
Not available
S-EPMC5540718 | biostudies-literature
UnknownStrainline: full-length de novo viral haplotype reconstruction from noisy long reads.
Not available
S-EPMC8771625 | biostudies-literature
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