Laminin a - OmicsDI

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biostudies-arrayexpress (450)
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Technology Type

Mass Spectrometry (76)
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Affinity purification coupled with mass spectrometry proteomics (3)
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Instrument Platform

Illumina NovaSeq 6000 (29)
Illumina HiSeq 2000 (15)
Illumina HiSeq 2500 (9)
NextSeq 500 (9)
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Illumina Genome Analyzer II (4)
Illumina NovaSeq X (4)
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10x Genomics Chromium Controller (2)
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Not (1)
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Not applicable (1)
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Publication Date

2014 (62)
2016 (54)
2015 (54)
2012 (52)
2011 (49)
2013 (44)
2025 (42)
2026 (39)
2020 (38)
2010 (34)
2023 (33)
2022 (33)
2019 (29)
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2018 (23)
2009 (21)
2021 (20)
2017 (18)
2007 (13)
2005 (3)
2006 (2)
2003 (1)

CHEBI ID

CHEBI:27974 (2)
CHEBI:28689 (2)
CHEBI:28300 (2)
CHEBI:17347 (2)
CHEBI:175580 (1)
CHEBI:188534 (1)
CHEBI:190916 (1)
CHEBI:31412 (1)
CHEBI:31471 (1)
CHEBI:188607 (1)
CHEBI:159024 (1)
CHEBI:186830 (1)
CHEBI:64183 (1)
CHEBI:87651 (1)
CHEBI:181883 (1)
CHEBI:91544 (1)
CHEBI:174783 (1)
CHEBI:79734 (1)
CHEBI:2927 (1)
CHEBI:68682 (1)
CHEBI:135658 (1)
CHEBI:189527 (1)
CHEBI:189455 (1)
CHEBI:183823 (1)
CHEBI:32323 (1)
CHEBI:36420 (1)
CHEBI:34031 (1)
CHEBI:75169 (1)
CHEBI:183107 (1)
CHEBI:88497 (1)

Metabolite Name

Dehydroepiandrosterone (DHEA) (2)
(-)-Spinosyn A (1)
(+)-Estrone (1)
(+/-)-Methoprene (1)
(1R,9S,12S,13R,14S,17R,18Z,21S,23S,24S,25S,27R)-17-Allyl-1,14,25-trihydroxy-12-{(1E)-1-[(1R,3R,4R)-4-hydroxy-3-methoxycyclohexyl]-1-propen-2-yl}-23-methoxy-13,19,21,27-tetramethyl-11,28-dioxa-4-azatricyclo[22.3.1.0~4,9~]octacos-18-ene-2,3,10,16-tetrone (1)
(21R)-27-Amino-24-hydroxy-24-oxido-18-oxo-19,23,25-trioxa-24lambda~5~-phosphaheptacosan-21-yl (13Z)-13-docosenoate (1)
(2E,4E,6E,8E,10E,12E,14E)-15-(4-Hydroxy-2,6,6-trimethyl-1-cyclohexen-1-yl)-4,9,13-trimethyl-2,4,6,8,10,12,14-pentadecaheptaenal (1)
(2R)-1-{[(2-Aminoethoxy)(hydroxy)phosphoryl]oxy}-3-hydroxy-2-propanyl (13Z)-13-docosenoate (1)
(2R)-2,3-Bis[(1Z,11Z)-1,11-octadecadien-1-yloxy]propyl 2-(trimethylammonio)ethyl phosphate (1)
(2Z,4E,6E,8E,10E,12E,14Z)-15-(6-Hydroxy-4,4,7a-trimethyl-2,4,5,6,7,7a-hexahydro-1-benzofuran-2-yl)-2,6,11-trimethyl-2,4,6,8,10,12,14-hexadecaheptaenal (1)
(3alpha,5alpha,17beta)-17-Hydroxyandrostan-3-yl beta-D-glucopyranuronate (1)
(3E,5E,7E,9Z,11E,13E,15Z,17E)-18-(4-Hydroxy-2,6,6-trimethyl-1-cyclohexen-1-yl)-3,7,12,16-tetramethyl-3,5,7,9,11,13,15,17-octadecaoctaen-2-one (1)
(6R,10S)-13-[(2S)-6-Hydroxy-2,5,7,8-tetramethyl-3,4-dihydro-2H-chromen-2-yl]-2,6,10-trimethyltridecanoic acid (1)
[8-Formyl-5-methoxy-2-methyl-2-(4-methyl-2-oxo-3-penten-1-yl)-3,4-dihydro-2H-chromen-7-yl]methyl (9E,12E)-9,12-octadecadienoate (1)
{2-[2-(Isobutyryloxy)-4-methylphenyl]-2-oxiranyl}methyl 2-methylbutanoate (1)
1-(1H-Imidazol-5-yl)-3-(phosphonooxy)-2-propanone (1)
1-(9Z-hexadecenoyl)-2-(9Z,12Z-octadecadienoyl)-sn-glycerol (1)
1,1-Dichloroethene (1)
1-[(9Z)-tetradecenoyl]-2-[(5Z,8Z,11Z,14Z)-icosatetraenoyl]-sn-glycerol (1)
11-Nitro-1-undecene (1)
12-deoxyphorbol 20-acetate 13-(2-methylbutanoate) (1)
14,18-Dihydroxy-12-oxo-9,13,15-octadecatrienoic acid (1)
17,21-Dihydroxypregnenolone (1)
1-aminocyclopropanecarboxylic acid (ACPC) (1)
1-oleoyl-2-arachidonoyl-sn-glycerol-3-phosphoethanolamine (1)
2,3-Dinor-11b-PGF2alpha (1)
2,3-Dinor-8-epi-prostaglandin F2¬¶√ (1)
2,4-Bis(2,4-dimethylphenyl)-6-(2-hydroxy-4-n-octyloxyphenyl)-1,3,5-triazine (1)
2,6-Diamino-4-hexenoic acid (1)
2444643WXK (1)

First Public Date

2014 (45)
2026 (34)
2025 (29)
2024 (26)
2020 (26)
2022 (16)
2023 (12)
2017 (12)
2019 (10)
2018 (9)
2015 (8)
2021 (5)
2016 (3)
2013 (2)

Classification

bacteria (1)

Study type

Transcription profiling by array (242)
RNA-seq of coding RNA (85)
ChIP-seq (30)
Methylation profiling by array (18)
Other (11)
RNA-seq of coding RNA from single cells (10)
Unknown experiment type (7)
Comparative genomic hybridization by array (6)
DNA-seq (6)
ChIP-chip by tiling array (4)
Methylation profiling by high throughput sequencing (4)
RNA-seq of non coding RNA (4)
Genotyping by array (3)
Cell line - Single-cell sequencing (2)
ATAC-seq (2)
Hi-C (2)
MicroRNA profiling by array (2)
RNA-seq of total RNA (2)
Cell line - Methylation microarray (1)
Animal - One-color microarray (1)
Animal - Single-cell sequencing (1)
Cell line - One-color microarray (1)
ChIP-chip by array (1)
Spatial transcriptomics by high-throughput sequencing (1)
RIP-seq (1)
Single nucleus RNA sequencing (1)
Proteomic profiling by array (1)
CUT&RUN (1)

Release Date

2022 (202)
2020 (195)
2016 (188)
2023 (187)
2021 (186)
2025 (180)
2014 (170)
2018 (166)
2019 (159)
2015 (150)
2012 (146)
2017 (138)
2024 (125)
2011 (116)
2013 (115)
2010 (85)
2009 (72)
2008 (67)
2007 (45)
2006 (29)
2026 (28)
2005 (18)
2003 (13)
2004 (12)
2001 (12)
2002 (11)
2000 (9)
1998 (6)
1997 (6)
1999 (5)

Lab affiliation

Cell matrix biology and regenerative medicine, School of biological sciences, University of manchester (2)
Copenhagen Center for Glycomics and Department of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, DK-2200 Copenhagen N, Denmark (2)
Wilmer Eye Institute, Smith Building, M015, 400 N. Broadway, Baltimore, MD 21287 (2)
1. College of Marine Science, Hainan University, Haikou 570228, China; 2. State Key Laboratory of Marine Resource Utilization in South China Sea, Haikou 570228, China) (1)
1Department of Biomedical Sciences, University of Copenhagen, Copenhagen, Denmark (1)
Affiliated Hospital of Nanjing University of Chinese Medicine (1)
Analytical Chemistry Core Lab (ACL) – Proteomics Unit Building 2 east, Level 2, 2281-WS05 King Abdullah University of Science and Technology (KAUST) Thuwal, 23955-6900, Kingdom of Saudi Arabia (1)
Analytical Chemistry Lab Fondazione Istituto Italiano di Tecnologia Via Morego 30, 16163 Genova Italy (1)
Biochemistry, University of Turku, Turku, Finland (1)
CECAD Excellent in Aging Research Cluster of Excellence for Aging Research at the University of Cologne Joseph-Stelzmann-Straße 26 50931 Cologne (1)
CRUK Scotland Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD Department of Biochemistry, University of Cambridge, Cambridge, CB2 1GA, UK (1)
Cedars-Sinai Medical Center, Heart Institute, Los Angeles, CA. United States of America (1)
Cell matrix biology and regenerative medicine, School of Biological Sciences, University of Manchester (1)
Cellzome (1)
Clinical Proteomics Group, University of Oxford, United Kingdom (1)
Department of Basic and Clinical Neuroscience, The Maurice Wohl Clinical Neuroscience Institute, Institute of Psychiatry, Psychology, & Neuroscience, King’s College London, London, UK (1)
Department of Cell Biology, Harvard Medical School, Boston MA, USA (1)
Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA Ludwig Institute for Cancer Research, Princeton Branch, Princeton University, Princeton, NJ 08544, USA (lab head) (1)
Department of Gastroenterology and Hepatology Tytgat Institute for Liver and Intestinal Research Amsterdam UMC, University of Amsterdam (1)
Department of Laboratory Medicine and Pathology Mayo Clinic, Rochester, Minnesota 55905 United States (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm, Sweden (1)
Department of Molecular Systems Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran (1)
Department of Molecular and Cellular Hemostasis, Sanquin Research, Amsterdam, 1066CX, The Netherlands (1)
Department of Ophthalmology, Johns Hopkins University School of Medicine, Baltimore, MD (1)
Department of Pathology, The University of Michigan Medical School, Ann Arbor, Michigan, United States of America (1)
Department of Pediatrics University of Maryland, School of Medicine (1)
Department of Proteomics and Signal Transduction Max Planck Institute of Biochemistry (1)
Dept of Microbial Sciences, School of Bioscience and Medicine, University of Surrey (1)
Discovery Proteomics Laboratory, University of Oxford, UK (1)
Division of Cancer Sciences, University of Manchester (1)

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Transcription profiling of diaphragm muscles from alpha2-laminin (merosin)-deficient dy/dy dystrophic mice and wild type mice to study differential gene expression.

Laminin (merosin) deficient muscular dystrophy in dy/dy mouse diaphragm muscle, 8 weeks old Experiment Overall Design: 4 normal samples; 4 dystrophic samples; Each sample consists of muscle pooled from 3 mice, thus a total of 12 normal and 12 dystrophic mice were studied

ORGANISM(S): Mus musculus

2007-12-01 | E-GEOD-3252 | biostudies-arrayexpress

Cross-linking of mouse laminin 111

Laminin, a ~800 kD heterotrimeric protein, is a major functional component of the extracellular matrix, contributing to tissue development and maintenance. We used cross-linking and mass spectrometry to determine the order of subunits in the ~750 Å trimeric coiled-coil oligomerization domain of lami...

ORGANISM(S): Mus musculus (Mouse)

2016-12-22 | PXD004898 | Pride

TLR 4 Signaling Inhibitory Pathway Induced by Green Tea Polyphenol Epigallocatechin-3-Gallate through 67-kDa Laminin Receptor

Epigallocatechin-3-gallate (EGCG), a major active polyphenol of green tea, has been shown to downregulate inflammatory responses in macrophages; however, the underlying mechanism has not been understood. Recently, we identified the 67-kDa laminin receptor (67LR) as a cell-surface EGCG receptor that ...

ORGANISM(S): Mus musculus

2010-04-20 | E-GEOD-21320 | biostudies-arrayexpress

Label-free mass spectrometry analysis of laminin with induced oxidations and chlorination’s facilitated with hypochlorous acid and myeloperoxidase treatments.

Basement membranes are specialized extracellular matrices that underlie arterial wall endothelial cells, with laminin being a key structural and biologically-active component. Hypochlorous acid (HOCl), a potent oxidizing and chlorinating agent, is formed in vivo at sites of inflammation, via the enz...

ORGANISM(S): Mus musculus (Mouse)

2025-11-05 | PXD022056 | Pride

Ecm Lc-ms/ms Oxidation Extracellular matrix proteins Inflammation. Chlorination Laminin

Transcription profiling of laminin binding and laminin non-binding germ cells to define the spermatogonial stem cells.

Comparison of laminin binding and laminin non-binding germ cells.

ORGANISM(S): Mus musculus

2007-12-19 | E-GEOD-829 | biostudies-arrayexpress

Transcription profiling time series of finite life span and immortal non-malignant human mammary epithelial cell lines

We analyzed gene expression in 184 (finite life span) and HMT3522 S1 (immortal non-malignant) HMECs on successive days (3, 5, and 7) post-seeding in a laminin-rich extracellular matrix assay. Both HMECs underwent growth arrest in G0/G1 and differentiated into polarized acini between days 5 and 7.

ORGANISM(S): Homo sapiens

2007-03-15 | E-MEXP-1006 | biostudies-arrayexpress

Transcription profiling of human mammary epithelial cell lines with finite life span and immortal non-malignant cells - time series

Nonmalignant human mammary epithelial cells (HMEC) seeded in laminin-rich extracellular matrix (lrECM) form polarized acini and, in doing so, transit from a disorganized proliferating state to an organized growth-arrested state. We hypothesized that the gene expression pattern of organized and growt...

ORGANISM(S): Homo sapiens

2008-06-15 | E-GEOD-8096 | biostudies-arrayexpress

Abnormal Wnt and PI3Kinase signaling in the malformed intestine of lama5 deficient mice

Laminins are major constituents of basement membranes and are essential for tissue homeostasis. Laminin-511 is highly expressed in the intestine and its absence causes severe malformation of the intestine and embryonic lethality. To understand the mechanistic role of laminin-511 in tissue homeostasi...

ORGANISM(S): Mus musculus

2012-06-29 | E-GEOD-31334 | biostudies-arrayexpress

Knockdown of laminin alpha 5 chain in colorectal cancer cell line HT-29

Laminin-mediated signaling via membrane receptors actively participate in most normal biological process and pathologies. Laminins involve in all step of metastatic cascade including tumor cell proliferation, migration, anoikis resistance, extravasation, epithelial to mesenchymal transition etc. The...

ORGANISM(S): Homo sapiens

2019-03-18 | E-MTAB-7754 | biostudies-arrayexpress

miRNA expression profile of mouse Lewis lung carcinoma LLC1 cell line cultivated in 2-dimensional or 3-dimensional cell culture enriched with laminin rich extracellular matrix proteins

The extracellular matrix (ECM), as one of the key components of tumor microenvironment has a high impact on cancer development and highly influences tumor cell features. ECM contribute not only structural support to growing tumor cells, but also affect other cellular functions such as cell different...

ORGANISM(S): Mus musculus

2015-12-10 | E-GEOD-75862 | biostudies-arrayexpress

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