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GenomicsMapping and Quantification of Genome-wide DNA Damages by Catechol Estrogens Using Click probe-Seq and LC/MS2: Unraveling Endogenous Genotoxicity Beyond Receptor-mediated Signaling
Genotoxic estrogen metabolites generate various endogenous DNA lesions but their carcinogenesis mechanisms have been overlooked by well-known cell proliferation pathways through estrogen receptor (ER). Genome-wide sequencing using click probe enrichment coupled with liquid chromatography-mass spectr...
ORGANISM(S): Homo sapiens 
2025-02-03 | GSE279116 | GEO
ProteomicsSTRAP regulates alternative splicing fidelity during lineage commitment of mouse embryonic stem cells
STRAP protein was IP'd and corresponding binding proteins were identified by high resolution nanoLCMS2 vs a control experiment.
ORGANISM(S): Mus musculus (Mouse) 
2020-09-10 | PXD015371 | Pride
Proteomics Strap Stem cells 
MetabolomicsGNPS - Aspergillus 3G cocultured with Phellinus noxius
This is the LCMS2 dataset from extract of Aspergillus strain 3G cocultured with Phellinus noxius
ORGANISM(S): Aspergillucs 3g And Phellinus Noxius 
2018-03-29 | MSV000082223 | GNPS
UnknownThe Chemical Characterization of Nigerian Propolis samples and Their Activity Against Trypanosoma brucei.
Not available
S-EPMC5430459 | biostudies-literature
Genomics
DNA Damages by Catechol Estrogens Using Click-Seq
PRJNA1169547 | ENA
OtherUC_Severity_Multiomics
This study contains multiple omic data sets. Here we have data from a quantitative metaproteomic, metabolomic, and serum proteomic analysis of 40 patients with varying severity of Ulcerative Colitis. Fecal samples were analyzed through proteomics using TMT MS3 quantitation. Fecal samples were analyz...
ORGANISM(S): Bacteria (ncbitaxon:2) Homo Sapiens (ncbitaxon:9606) 
2018-02-23 | MSV000082094 | MassIVE
ProteomicsIBD200: Multi-omics of IBD Severity Study
This study contains multiple -omic data sets. As a follow up to a study on 40 Ulcerative Colitis patients (MSV000082094), 210 fecal samples were analyzed through proteomics using Tandem Mass Tag (TMT) MS3 quantitation. Samples include both Ulcerative Colitis and Crohn's disease patients with healthy...
ORGANISM(S): Bacteria Homo Sapiens (ncbitaxon:9606) 
2020-11-23 | MSV000086509 | MassIVE
ProteomicsEarly-adulthood spike in protein translation drives aging via juvenile hormone/germline signaling
Protein translation (PT) declines with age in invertebrates, rodents, and humans. It has been assumed that elevated PT at young ages is beneficial to health and PT ends up dropping as a passive byproduct of aging. In Drosophila, we show that a transient elevation in PT during early-adulthood exerts ...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2023-10-24 | PXD044118 | Pride
Proteostasis Aging Proteomics Lcms2 Drosophila 
ProteomicsSalinity-dependent proteome dynamics in Nile tilapia gills
Experiments and fish acclimations were performed in the laboratory of Prof. Avner Cnaani at the Agricultural Research Organization (ARO) Volcani Center (Israel). Proteomics sample preparation and biological mass spectrometry analyses (DDA) were performed in the laboratory of Prof. Dietmar Kueltz at ...
ORGANISM(S): Oreochromis Niloticus (ncbitaxon:8128) 
2020-06-27 | MSV000085639 | MassIVE
MetabolomicsGNPS UC_Severity_Multiomics MSV000082094
This study contains multiple omic data sets. Here we have data from a quantitative metaproteomic, metabolomic, and serum proteomic analysis of 40 patients with varying severity of Ulcerative Colitis. Fecal samples were analyzed through proteomics using TMT MS3 quantitation. Fecal samples were analyz...
ORGANISM(S): Bacteria (ncbitaxon:2) Homo Sapiens (ncbitaxon:9606) 
2018-02-23 | MSV000082094 | GNPS
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