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ProteomicsSynthetic Methylotrophic E. coli proteomics
To effectively use methanol derived from CO2 or methane in E. coli, it is crucial to develop a fast-growing strain that can efficiently process methanol. We successfully developed a methylotrophic E. coli strain, SM6, which has a doubling time of 3.5 hours, surpassing the growth rates of typical nat...
ORGANISM(S): Escherichia coli 
2024-04-24 | PXD051688 | Pride
Synthetic methylotroph Methanol Proteomics E. coli Synthetic biology 
UnknownFrom Protocols to Publications: A Study in Selective Reporting of Outcomes in Randomized Trials in Oncology.
Not available
S-EPMC4979242 | biostudies-literature
ProteomicsBacterial supplementation shapes honey bee gut microbiota, metabolism and proteome under controlled and field conditions
This study investigated how gut-derived bacterial supplementation influences the honey bee gut microbiota, metabolism, and proteome under three experimental settings: (i) controlled laboratory conditions (C versus B), (ii) semi-controlled laboratory conditions with or without social interaction with...
ORGANISM(S): Apis mellifera (Honeybee) 
2026-05-15 | PXD066488 | Pride
Digestive tracts Probiotics Lfq proteomics Honeybee 
ProteomicsProteomic analysis of Bombus terrestris queen haemolymph
Enabled by recently available genomic resources for bumblebees, nano LC-MS/MS based proteomics was conducted to characterise the queen haemolymph proteome. The resulting mass spectrometry data were also utilised in a proteogenomic capacity to identify proteins missing from official gene sets and to ...
ORGANISM(S): Bombus terrestris (Buff-tailed bumblebee) (Apis terrestris) 
2015-02-24 | PXD001644 | Pride
Bumblebee Proteogenomics Haemolymph profile Queen 
UnknownCrystal structures of the main peptidase from the SARS coronavirus inhibited by a substrate-like aza-peptide epoxide.
Not available
S-EPMC7094542 | biostudies-literature
Transcriptomics454 Life Sciences/Roche and Illumina sequencing of small RNAs from planarian samples
Freshwater planarian flatworms possess uncanny regenerative capacities mediated by abundant and collectively totipotent adult stem cells. Key functions of these cells during regeneration and tissue homeostasis have been shown to depend on PIWI, a molecule required for piRNA expression in planarians....
ORGANISM(S): Schmidtea mediterranea 
2009-06-30 | E-GEOD-16159 | biostudies-arrayexpress
UnknownPhase III Prospective Randomized Comparison Trial of Depot Octreotide Plus Interferon Alfa-2b Versus Depot Octreotide Plus Bevacizumab in Patients With Advanced Carcinoid Tumors: SWOG S0518.
Not available
S-EPMC5455764 | biostudies-literature
TranscriptomicsTranscription profiling of peripheral blood leukocyte subsets in autoimmune/autoinflammatory disease patients and healthy controls
Gene expression microarray profiling was performed on peripheral blood leukocyte subsets (CD4+ T cells, CD14+ monocytes, and CD16+ neutrophils) from healthy controls and patients with flaring autoimmune disease.
ORGANISM(S): Homo sapiens 
2014-08-31 | E-MTAB-2452 | biostudies-arrayexpress
UnknownComparison of Glomerular and Podocyte mRNA Profiles in Streptozotocin-Induced Diabetes.
Not available
S-EPMC4814194 | biostudies-literature
GenomicsIn vivo T-box Transcription Factor Profiling Reveals Joint Regulation of Embryonic Neuro-mesodermal Bipotency.
We defined genome-wide regulatory inputs of the T-box transcription factors Brachyury (Xbra), Eomesodermin (Eomes) and VegT that maintain neuro-mesodermal stem cells and determine their bipotential fates in the Xenopus tropicalis frog embryo. Binding profiles for Xbra, Eomes and VegT in X. tropicali...
ORGANISM(S): Xenopus (Silurana) tropicalis 
2013-09-19 | E-GEOD-48560 | biostudies-arrayexpress
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