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MetabolomicsShort-term changes in the serum metabolome after laparoscopic sleeve gastrectomy and Roux-en-Y gastric bypass

INTRODUCTION: Bariatric surgery is known to be the most effective treatment for weight loss in obese patients and for the rapid remission of obesity-related comorbidities. These short-term improvements result from not only limited digestion or absorption but also dynamic changes ...

2022-03-17 | MTBLS2472 | MetaboLights
MetabolomicsThe Green Tea Modulates Large Intestinal Microbiome and Exo/Endogenous Metabolome altered through Chronic UVB-exposure (Endogenous assays)
The attenuating effects of green tea supplements (GTS) against the ultraviolet (UV) radiation induced skin damages are distinguished. However, the concomitant effects of GTS on the large intestinal microbiomes and associated metabolomes are largely unclear. Herein, we performed an integrated microbi...
2018-09-14 | MTBLS527 | MetaboLights
ProteomicsComprehensive proteomics for Discovery vaccine candidates against Streptococcus equi Infections
Streptococcus equi subspecies equi (S. equi) is a major pathogen which cause strangles, a highly contagious respiratory infection, in horses and other equines.In this study, we discovered potential vaccine candidates using comprehensive proteomics and reverse vaccinology. As the initial step, we div...
ORGANISM(S): Streptococcus equi subsp. equi 4047 
2021-08-06 | PXD025152 | Pride
Secretory proteome Label-free Membrane proteome Streptococcus equi Extracellular vesicle Whole cell lysate Lc-ms Comprehensive proteome 
ProteomicsMissing proteins identified from the haploid cell lines: HAP1 and KBM-7
Chromosome-centric Human Proteomic Project (C-HPP) aims at identifying and characterizing protein products encoded from all protein-coding genes of human chromosomes. As evident in the recent nature papers, it is possible that those missing proteins may be low abundant in many cell types or expresse...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-06-10 | MSV000083952 | MassIVE
ProteomicsRifampicin-mouse liver proteomics
Tuberculosis is one of top causes of death among curable infectious diseases; it is an airborne infectious disease that kills 2 million people worldwide. Anti-tuberculosis drug-induced liver injury is the primary cause of drug-induced liver injury (DILI). Rifampicin is one of the most common anti-tu...
ORGANISM(S): Mus musculus (Mouse) 
2017-07-10 | PXD006313 | Pride
Mouse liver Toxicoproteomics Tmt labeling Rifampicin 
ProteomicsComprehensive proteomics for Discovery vaccine candidates against Streptococcus equi Infections
Streptococcus equi subspecies equi (S. equi) is a major pathogen which cause strangles, a highly contagious respiratory infection, in horses and other equines. In this study, we purified the extracellular vesicles (EVs) of S. equi ATCC 39506 and evaluated them as vaccine candidates against S. equi i...
ORGANISM(S): Mus musculus (Mouse) Streptococcus equi subsp. equi 
2021-08-06 | PXD025527 | Pride
Label-free Lc-ms Streptococcus equi Extracellular vesicle Immunoprecipitation-ms 
TranscriptomicsMicroarray data from pre-germinated seeds and hypoxia-treated seedlings of Arabidopsis prt6-1 and ate1 ate2 mutants of the N-end rule pathway of targeted proteolysis pathway
This study analyzes transcriptome profiles in pre-germinated seeds and hypoxia-treated seedlings of Arabidopsis thaliana wild type (Col-0) and homozygous mutants (prt6-1 and ate1 ate2). This dataset includes CEL files, RMA signal values and MAS5 P/M/A calls. For pre-germinated seeds, seeds imbibed f...
ORGANISM(S): Arabidopsis thaliana 
2011-10-22 | E-GEOD-29941 | biostudies-arrayexpress
ProteomicsVersatile human cardiac tissues engineered with perfusable heart extracellular microenvironment for biomedical applications
Engineered human cardiac tissues have been utilized for various biomedical applications, including drug testing, disease modeling, and regenerative medicine. However, the applications of cardiac tissues derived from human pluripotent stem cells are often limited due to their immaturity and lack of f...
ORGANISM(S): Sus scrofa domesticus (domestic pig) 
2024-02-03 | PXD042077 | Pride
Decellularization 
ProteomicsT cell microvilli constitute immunological synaptosomes that carry messages to antigen-presenting cells
Lists of proteins that were commonly detected in total, membrane, TMP, and vesicles.
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2018-08-15 | MSV000082822 | MassIVE
ProteomicsLC-MSMS analysis in Arabidopsis thaliana
Spliceosome dephosphorylation is essential control step that enables intron removal from pre-mRNA for the regulation of gene expression. However, the phosphatase that is biologically responsible has not been identified. Here we show that PP2A B́ η, a B subunit of PP2A phosphatase, associates with sp...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2025-06-02 | PXD047933 | Pride
Lc-msms A. thaliana Phosphorylation 
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