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The experiment was performed using three N. gonorrhoeae clinical isolates and N. gonorrhoeae strain ATCC 49226 was used as a reference strain. Tandem mass spectra were processed by PEAKS Studio version 8.5 (Bioinformatics Solutions Inc., Waterloo, Canada). PEAKS DB was set up to search the database ...
ORGANISM(S): Neisseria gonorrhoeae 
2019-10-22 | PXD015296 | Pride
In this study, we performed a global quantitative proteomic analysis under extreme temperatures, pH, hydrostatic pressure (HP) and salinity on an archaeal strain, Thermococcus eurythermalis A501. Here is the result of pH adaptation: low pH (pH 4) and high pH (pH 9), and the optimal culture condition...
ORGANISM(S): Thermococcus eurythermalis 
2020-09-09 | PXD018974 | Pride
Biomarkers of neurodegenerative disorders are needed to assist in diagnosis, to monitor disease progression and therapeutic interventions, and to provide insight into disease mechanisms. One route to identify such biomarkers is by proteomic and peptidomic analysis of cerebrospinal fluid (CSF). In t...
ORGANISM(S): Homo sapiens (Human) 
2017-01-17 | PXD004863 | Pride
Due to the distinctive features of oral mucosa, determination of the proteins involved in the formation of “oral protein pellicle” is demanding. The present study investigated the susceptibility of several human basic proline-rich peptides (bPRPs) named P-H, P-D, P-F, P-J, and II-2 as substrates of ...
ORGANISM(S): Homo sapiens (Human) 
2019-10-25 | PXD014658 | Pride
Two types of photosystem reaction centers (PSI and PSII) are physically connected each other in Arabidopsis. Excitation energy is transferred efficiently between the two closely interacting reaction centers.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2016-05-26 | PXD001803 | Pride
The enriched low mass proteome is unexplored as a source of differentiators for diagnosing and monitoring Inflammatory Bowel Disease (IBD) activity, less invasively than colonoscopy and histopathology. Differences in the enriched low mass plasma proteome (<25kDa) were assessed by label-free quantita...
ORGANISM(S): Homo sapiens (Human) 
2015-11-06 | PXD002821 | Pride
Bacteria were washed three times in NaCl (150 mM). Cells were resuspended in 1 ml TSU buffer (50 mM Tris pH 8.0, 0.1% SDS, 2.5 M urea) and lysed by two freeze-thaw cycles in liquid nitrogen. Lysate proteins (40 ug) were separated and digested. Digested peptides were separated by nano-LC using an U...
ORGANISM(S): Campylobacter concisus (strain 13826) 
2014-04-28 | PXD000504 | Pride
Washed three times in NaCl (150 mM). Cells were resuspended in 1 ml TSU buffer (50 mM Tris pH 8.0, 0.1% SDS, 2.5 M urea) and lysed by two freeze-thaw cycles in liquid nitrogen. Lysate proteins (40 ug) were separated and digested. Digested peptides were separated by nano-LC using an Ultimate 3000 ...
ORGANISM(S): Campylobacter concisus UNSWCD 
2014-04-28 | PXD000505 | Pride
Capsular contracture (CC) is one of the most common post-operative complication associated with breast-implant associated infections. The mechanisms that lead to CC remain poorly understood. Plasma is an ideal biospecimen for early proteomics biomarker discovery. However, as higher-abundant proteins...
ORGANISM(S): Homo sapiens (Human) 
2024-10-17 | PXD044649 | Pride
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