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Unknown (5364)
Proteomics (38)
Transcriptomics (35)
Genomics (35)
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Genomic (1)

Organisms

Homo sapiens (36)
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Escherichia coli (4)
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Secale cereale x Triticum turgidum subsp. durum (1)
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Bacteria (1)
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Organisms

Homo sapiens (4)
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (2)
Escherichia coli (2)
Legionella pneumophila (1)
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Glycine max (1)
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Bacteria (1)
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Repository

biostudies-arrayexpress (40)
pride (31)
ENA (21)
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dbGaP (1)
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Tissue

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Blood (3)
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Disease

Uveal melanoma (3)
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Acute leukemia (1)
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Cystic fibrosis (1)
Dilated cardiomyopathy (1)
Disease free (1)
Mixed disorder as reaction to stress (1)
Pre-eclampsia (1)
Trypanosomiasis (1)

Technology Type

Mass Spectrometry (31)
Shotgun proteomics (13)
Mass spectrometry (9)
Bottom-up proteomics (9)
Affinity purification coupled with mass spectrometry proteomics (5)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-independent acquisition (2)
Data-dependent acquisition (1)
DiaPASEF (1)
Gel-based experiment (1)
MSE (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Q Exactive (3)
Illumina HiSeq 2500 (2)
Illumina HiSeq 2000 (2)
Orbitrap Exploris 240 (2)
Orbitrap Fusion (2)
5975C Series GC/MSD (Agilent) (2)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
Xevo G2 XS Tof|1002729 (1)
LTQ Orbitrap Velos (1)
LTQ Velos (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
LTQ Classic (Thermo Scientific) (1)
LTQ Orbitrap Classic (Thermo Scientific) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - positive - reverse phase (1)
SYNAPT G2-XS QTOF (Waters, UK) (1)

Publication Date

2024 (11)
2014 (9)
2021 (8)
2013 (7)
2022 (7)
2026 (6)
2025 (5)
2020 (4)
2016 (4)
2006 (4)
2019 (4)
2012 (3)
2010 (3)
2023 (3)
2018 (3)
2017 (2)
2015 (2)
2009 (2)
2011 (1)
2008 (1)

UNIPROT ID/AC

P00722 (1)
P02920 (1)

CHEBI ID

CHEBI:15428 (5)
CHEBI:15741 (5)
CHEBI:17268 (5)
CHEBI:18012 (5)
CHEBI:30746 (5)
CHEBI:32816 (5)
CHEBI:6650 (5)
CHEBI:15756 (4)
CHEBI:16335 (4)
CHEBI:17368 (4)
CHEBI:17568 (4)
CHEBI:26078 (4)
CHEBI:78320 (4)
CHEBI:15354 (3)
CHEBI:15721 (3)
CHEBI:15746 (3)
CHEBI:15891 (3)
CHEBI:15927 (3)
CHEBI:15963 (3)
CHEBI:15978 (3)
CHEBI:15999 (3)
CHEBI:16010 (3)
CHEBI:16235 (3)
CHEBI:16393 (3)
CHEBI:16414 (3)
CHEBI:16530 (3)
CHEBI:16566 (3)
CHEBI:17716 (1)
CHEBI:33699 (1)
CHEBI:36229 (1)

Metabolite Name

Fumarate (4)
Glycine (4)
Hypoxanthine (4)
Myo-inositol (4)
Succinate (4)
3-ureidopropionate (3)
Adenine (3)
Adenosine (3)
Choline (3)
Glucose (3)
Lactate (3)
Leucine (3)
Malate (3)
Malonate (3)
Phenylalanine (3)
Pipecolate (3)
Proline (3)
Pyridoxal (3)
Serine (3)
Sphinganine (3)
Sphingosine (3)
Taurine (3)
Thymidine (3)
Tyrosine (3)
Valine (3)
1-(1-enyl-palmitoyl)-GPE (P-16:0)* (2)
1-(1-enyl-stearoyl)-GPE (P-18:0)* (2)
1-arachidonoyl-GPA (20:4) (2)
1-arachidonoyl-GPI (20:4)* (2)
1-linolenoyl-GPC (18:3)* (2)

First Public Date

2014 (6)
2024 (3)
2023 (3)
2020 (3)
2026 (2)
2025 (1)
2021 (1)
2019 (1)
2018 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Infectious Diseases and Immunity in Global Health Program, Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada (2)
1-Department of Biochemistry and Molecular Medicine; Université de Montréal; C.P. 6128, Succ. Centre-Ville, Montréal, Québec, H3C 3J7; Canada. 2-Institut de Recherches Cliniques de Montréal, 110 Avenue des Pins Ouest, Montréal, Québec, H2W 1R7; Canada. 3-Faculty of Medicine, Division of Experimental Medicine, McGill University, Montréal, Québec, H3A 1A3; Canada. (1)
1. Department of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada; 2. University of Victoria Genome BC Proteomics Centre, University of Victoria, Victoria, British Columbia, Canada; 3. Gerald Bronfman Department of Oncology, Jewish General Hospital, Montreal, Quebec, Canada; 4. Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Quebec, Canada (1)
Assistant Professor Department of Biochemistry Gene & Protein Expression McGill University, Montreal (1)
Assistant Professor, Oncology and Pathology McGill University Health Centre Research Institute Cancer Research Program MUHC Glen Site 1001 Decarie Boulevard Montreal, Quebec H4A 3J1 (1)
Associate Professor in the Department of Anatomy and Cell Biology at McGill University in Montreal, Quebec, Canada (1)
Associate Research Professor, Institut de recherches cliniques de Montréal (IRCM) Professeure agrégée, Département de biochimie et médecine moléculaire, Université de Montréal Associate Professor, Division of Experimental Medicine, McGill University (1)
Department of Medicine, Faculty of Medicine, McGill University (1)
Department of Medicine, McGill University, Montreal, Quebec, Canada (1)
Department of Microbiology and Immunology, McGill University, Montreal, QC, Canada Meakins-Christie Laboratories, Research Institute of the McGill University Health Center, Montreal, QC, Canada (1)
Department of Pharmacology & Therapeutics, McGill University, 3655 Prom. Sir-William-Osler, Montreal, Quebec, H3G 1Y6, Canada. McGill Centre for Microbiome Research, Montreal, Quebec, Canada (1)
Department of Physiology, McGill University, Advanced BioImaging Facility (ABIF), McGill University (1)
Goodman Cancer Institute, McGill University (1)
Institut de recherches cliniques de Montréal, Center for Genetic and Neurological Diseases,Montréal, QC, Canada Département de biochimie et médecine moléculaire, Université de Montréal, Montréal, QC, Canada Division of Experimental Medicine, McGill University, Montreal, QC, Canada (1)
James McGill Professor Director and CEO, BioFuelNet Canada Director, McGill Network for Innovation in Biofuels and Bioproducts Director, Eastern Canadian Oilseeds Development Initiative Plant Science Department, McGill University 21111 Lakeshore Road Ste. Anne de Bellevue, Quebec Canada H9X3V9 Phone: +1 514 398 7866 Fax: +1 514 398 7990 Website: www.mcgill.ca/plant/faculty/smith/ (1)
James McGill Professor of Neurology and Neurosurgery and Anatomy and Cell Biology Montreal Neurological Institute-Hospital McGill, Montreal CANADA (1)
Janusz Rak MD, PhD Jack Cole Chair in Pediatric Hematology/Oncology Professor, Department of Pediatrics McGill University The Research Institute of the McGill University Health Centre Montreal Children's Hospital 1001 Decarie Blvd, Office # E M1 2244 Montreal, Quebec, H4A 3J1 Phone: (514) 412-4400 ext-office: 76240; -lab: 76220; Fax (514) 412-4331 (1)
KAUST Smart-Health Initiative(KSHI)and Biological and Environmental Science and Engineering (BESE) Division, King Abdullah University of Science and Technology (KAUST), Jeddah, Saudi Arabia. Dept. of Biochemistry, McGill University, 3655 Promenade Sir William Osler, Montreal, QC, H3G1Y6, Canada. Rosalind & Morris Goodman Cancer Institute, McGill University, 1160 Pine Avenue, Montreal, QC, H3A1A3, Canada. (1)
King faisal Specialist Hospital and esearch Center (1)
Lady Davis Institute for Medical Research - Jewish General Hospital - McGill University (1)
Lady Davis Institute for Medical Research, Jewish General Hospital, McGill University, Montréal, QC, Canada. (1)
Lady Davis Institute, McGill University (1)
McGill University - Rosalind & Morris Goodman Cancer Institute (1)
McGill University, department of physiology, Canada (1)
Professor, Gerald Bronfman Department of Oncology, McGill University, Montréal, Quebec, H3G 1Y6, Canada (1)
Research Institute of the McGill University Health Centre (1)
Research Institute of the McGill University Health Centre, Montreal, QC, Canada (1)
Segal Cancer Proteomics Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, Montréal, Quebec, H3T 1E2, Canada Gerald Bronfman Department of Oncology, McGill University, Montréal, Quebec H4A 3T2, Canada Department of Pathology, McGill University, Montréal,Quebec H4A 3J1, Canada (1)
Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Canada. (1)
Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital,McGill University, Montréal, Québec,Canada (1)

IsPrivate

False (2)

Classification

bacteria (6)

Study type

Transcription profiling by array (25)
ChIP-seq (4)
RNA-seq of coding RNA (3)
Methylation profiling by array (2)
ChIP-chip by tiling array (1)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
Genotyping by array (1)
DNA-seq (1)

Release Date

2022 (641)
2025 (627)
2023 (572)
2024 (538)
2021 (522)
2020 (376)
2019 (365)
2017 (258)
2018 (252)
2016 (224)
2015 (214)
2014 (187)
2013 (123)
2026 (93)
2012 (85)
2011 (71)
2010 (57)
2009 (54)
2008 (37)
2007 (31)
2006 (18)
2005 (13)
2001 (12)
2004 (10)
2003 (7)
2002 (7)
2000 (5)
1999 (2)
1998 (1)
1997 (1)

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Transcriptional response of Escherichia coli O157:H7 to cinnamaldehyde

Cinnamaldehyde is a natural antimicrobial and has been found to be effective against many foodborne pathogens including Escherichia coli O157:H7. Although its antimicrobial effects have been well investigated, limited information is available on its effects at the molecular level. Sublethal treatmen...

ORGANISM(S): Escherichia coli O157:H7

2012-09-08 | E-GEOD-40693 | biostudies-arrayexpress

Untargeted proteomics of Enterocloster asparagiformis, E. citroniae, E. pacaense treated with DMSO or urolithin M6

Urolithins are a class of bioactive metabolites derived from the metabolism of dietary ellagitannins by the human gut microbiota. In the gut, urolithins are dehydroxylated regioselectively based on microbiota composition and activity. A single 9-hydroxy urolithin dehydroxylase (ucd) operon in gut re...

ORGANISM(S): Enterocloster hominis (ex Hitch et al. 2024) Enterocloster citroniae Enterocloster asparagiformis Bacteria

2025-11-12 | PXD066865 | Pride

Microbiome Dmso M6 Bacteria Enterocloster Urolithin

Pho regulon modulation of Enterohemorrhagic *Escherichia coli* O157:H7 virulence factors

In E. coli the phosphate homeostasis is regulated by the Pst system and the two-component system PhoB/R. Pathogens like E. coli O157:H7 are responsible for many outbreaks and can be found and survive in poor inorganic phosphate (Pi) environments. To understand global EHEC O157:H7 EDL933 strain respo...

ORGANISM(S): Escherichia coli

2014-03-15 | E-GEOD-50529 | biostudies-arrayexpress

Biomonitoring of metals in blood and urine of electronic waste (E-waste) recyclers at Agbogbloshie, Ghana.

Not available

S-EPMC8287752 | biostudies-literature

Patient satisfaction with e-oral health care in rural and remote settings: a systematic review.

Not available

S-EPMC9617039 | biostudies-literature

A systematic review of the effects of e-cigarette use on lung function.

Not available

S-EPMC9588082 | biostudies-literature

Multiple elemental exposures amongst workers at the Agbogbloshie electronic waste (e-waste) site in Ghana.

Not available

S-EPMC5048578 | biostudies-literature

Changes in gene expression in fruitfly ovaries in mutants affecting components of rasiRNA system

rasiRNA (rasiRNAs, repeat-associated short interfering RNAs) system is a mechanism of silencing of mobile element transpositions in germline of a number of species including Drosophila melanogaster. rasiRNA itself is a short RNAs which participate in transposon transcription repression and mRNA deg...

ORGANISM(S): Drosophila melanogaster

2013-03-11 | E-GEOD-40768 | biostudies-arrayexpress

Alveolar macrophage function is impaired following inhalation of berry e-cigarette vapor.

Not available

S-EPMC11459156 | biostudies-literature

e-Cigarettes, Smoking Cessation, and Weight Change: Retrospective Secondary Analysis of the Evaluating the Efficacy of e-Cigarette Use for Smoking Cessation Trial.

Not available

S-EPMC11443201 | biostudies-literature

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