Microsome - OmicsDI

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Unknown (154)
Proteomics (56)
Transcriptomics (16)
Genomics (7)
Metabolomics (5)
Other (4)

Organisms

Schizophyllum commune H4-8 (31)
Mycobacterium tuberculosis SP7 (31)
Oryza sativa Japonica Group (31)
Crotalus durissus terrificus (31)
Eriocheir sinensis (31)
Candidatus Endoriftia persephonae (31)
Mycobacterium tuberculosis SP10 (31)
Mycobacterium tuberculosis SP13 (31)
Mycobacterium tuberculosis SP22 (31)
Enterobacter ludwigii (31)
Chlamydomonas reinhardtii (31)
Lama (31)
Pyricularia oryzae P131 (31)
Enterococcus mundtii CRL35 (31)
Pongo pygmaeus (31)
Oncorhynchus tshawytscha (31)
Pseudomonas canadensis (31)
Mus musculus (7)
Homo sapiens (7)
Arabidopsis thaliana (2)
Culex quinquefasciatus (2)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (2)
Gasterosteus aculeatus (1)
Bos indicus (1)
Drosophila melanogaster (1)
Canis lupus familiaris (1)
Penicillium digitatum (1)
Zea mays (1)
Fusarium sinicum (1)
Spodoptera frugiperda (1)

Organisms

Culex quinquefasciatus (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)
Drosophila melanogaster (1)
Arabidopsis thaliana (1)
Homo sapiens (1)
Mus musculus (1)

Repository

pride (31)
biostudies-arrayexpress (12)
MassIVE (12)
ENA (7)
PAXDB (6)
geo (5)
jPOST (5)
GNPS (3)
GPMDB (2)
iProX (2)
MetaboLights (2)
PanoramaPublic (1)

Tissue

Liver (7)
Plant cell (6)
Cell culture (5)
Leaf (4)
Brain (2)
Epithelial cell (2)
Endothelial cell of venous sinus of red pulp of spleen (1)
Pollen tube (1)
Aleurone layer (1)
Flower (1)
Shoot (1)
Egg (1)
Oocyte (1)
Root (1)
Whole body (1)
Spleen (1)
Primary cell (1)
Permanent cell line cell (1)
Kidney (1)

Disease

Not Available (2)
Spleen angiosarcoma (1)
Salt (1)

Technology Type

Mass Spectrometry (31)
Shotgun proteomics (17)
Affinity purification coupled with mass spectrometry proteomics (5)
Mass spectrometry (2)
SWATH MS (2)
Data-independent acquisition (2)
Gel-based experiment (2)
Data-dependent acquisition (2)
SRM/MRM (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Q Exactive (7)
Synapt XS (2)
Instrument (2)
10x Genomics (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
6530 QTOF/MS (1)
6530 QTOF (1)
6520 Quadrupole Time-of-Flight LC/MS (1)
SYNAPT G2-Si (1)
6530A Q-TOF LC/MS (1)
ZenoTOF 7600 (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - negative - HILIC (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2022 (12)
2024 (11)
2023 (7)
2021 (6)
2020 (6)
2006 (6)
2025 (4)
2016 (3)
2015 (3)
2012 (3)
2018 (3)
2019 (3)
2010 (2)
2008 (2)
2017 (2)
2013 (1)
2011 (1)
2009 (1)
2005 (1)
2014 (1)

UNIPROT ID/AC

MBD3_MOUSE (6)
E9Q6E5_MOUSE (6)
UIF_MOUSE (6)
NHP2_MOUSE (6)
RL18A_MOUSE (6)
CALM1_MOUSE (6)
GSTP2_MOUSE (6)
10090.ENSMUSP00000136358 (6)
P5CR3_MOUSE (6)
10090.ENSMUSP00000048857 (6)
10090.ENSMUSP00000089346 (6)
10090.ENSMUSP00000089293 (6)
TPP1_MOUSE (6)
BOLA1_MOUSE (6)
PAF1_MOUSE (6)
CATIN_MOUSE (6)
10090.ENSMUSP00000113068 (6)
GLYR1_MOUSE (6)
COX2_MOUSE (6)
RL12_MOUSE (6)
WDR33_MOUSE (6)
RING1_MOUSE (6)
F6S4B9_MOUSE (6)
KXDL1_MOUSE (6)
HMGA1_MOUSE (6)
Q9EQC8_MOUSE (6)
TRA2B_MOUSE (6)
H11_MOUSE (6)
H15_MOUSE (6)
TOP2B_MOUSE (6)

CHEBI ID

CHEBI:228252 (1)
CHEBI:228253 (1)

Metabolite Name

4-MEAP (1)

First Public Date

2020 (2)
2014 (2)
2023 (1)
2021 (1)
2017 (1)

Classification

bacteria (1)

Study type

Transcription profiling by array (7)
MicroRNA profiling by high-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
Other (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of coding RNA (1)

Release Date

2024 (19)
2023 (15)
2022 (15)
2018 (15)
2021 (14)
2016 (11)
2025 (10)
2020 (9)
2019 (8)
2014 (8)
2015 (7)
2012 (6)
2017 (5)
2013 (4)
2010 (4)
2008 (4)
2011 (3)
2009 (3)
2006 (3)
2007 (2)
2005 (1)

Lab affiliation

College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University (2)
Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne, Germany (1)
UMR INRA 1347/AgroSup/Université de Bourgogne, Dijon, France (1)
Molecular Physiology & Biophysics Department , Wright Lab, University of Iowa, USA (1)
Department of Life Sciences, Korea University, Seoul 02841, Korea (1)
Leibniz-Forschungsinstitut für Molekulare Pharmakologie, Robert-Rössle-Str 10, 13125 Berlin (1)
Department of Microbial Proteomics, Institute of Microbiology, University of Greifswald, Germany (1)
Department of Clinical Pharmacy, University of Michigan (1)
Institute of Molecular Medicine and Cell Research, University of Freiburg, D-79104 Freiburg, Germany (1)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, VU University, Amsterdam, The Netherlands (1)
University of Wisconsin-Madison. Biochemistry Dept. Biotechnology Center. (1)
Department of Physiology, School of Medicine, Wayne State University (1)
Head, Cancer Proteomics Group, The University of Queensland Diamantina Institute (1)
Department of Comparative Biosciences, University of Illinois at Urbana-Champaign (1)
Center for Medical Research, University of Linz, Austria (1)
Kunming Institute of Botany,Chinese Academy of Sciences (1)
1Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, USA. 2Center for Plant Biology, Purdue University, West Lafayette, IN, USA. 3Department of Biological Sciences, Purdue University, West Lafayette, IN, USA. (1)
1 Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN 2 Center for Plant Biology, Purdue University, West Lafayette, IN 3 Department of Biological Sciences, Purdue University, West Lafayette, IN (1)
1. Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, USA. 2. Center for Plant Biology, Purdue University, West Lafayette, IN, USA. 3. Department of Biological Sciences, Purdue University, West Lafayette, IN, USA. (1)
Biology Department Pennsylvania State University (1)
Heidelberg University Centre for molecular biology (ZMBH) Im Neuenheimer Feld 282 69120 Heidelberg Germany (1)
Laboratory of Neurogenetics, National Institute on Aging, National Institute of Health, Building 35, Room 1A116 35 Convent Drive Bethesda, MD 20814, USA (1)
Zentrum für Molekulare Biologie (ZMBH), Mass Spectrometry and Proteomics (1)
Department of Clinical Pharmacy, University of Michigan College of Pharmacy (1)
Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne (1)
Team: Mass spectrometry of biological molecules Institute CBMN for Chemistry and Biology of Membranes and Nano-objects UMR 5248 CNRS-Bordeaux University 33607 Pessac - FRANCE (1)
Institute for Vascular Signalling, Centre for Molecular Medicine, Goethe-Universität, Frankfurt am Main, Germany (1)
Department of Cell Biology School of Medicine Johns Hopkins University Baltmore, MD USA (1)
Department of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, MD, USA (1)
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 50463, Republic of Korea (1)

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Transcripts enriched in microsome fraction in ribosome-independent manner

To identify the transcripts fractionated into microsome fraction in ribosome-independent manner, we isolate rough microsome fraction by sucrose density gradient ultracengrifugation, then the rough microsome fraction is centrifugated following treatment with puromycine and EDTA in high-salt buffer to...

ORGANISM(S): Drosophila melanogaster

2016-12-25 | GSE85768 | GEO

Human TRIM72 localizes on the microsome

Membrane repair machinery is a unique process to maintain cell integrity. In the early step of repair process, TRIM72 facilitates the patch membranes to damaged sites for resealing membrane and protects cells from acute membrane injury. The TRIM72 is an E3 ubiquitin ligase belonging to tripartite mo...

ORGANISM(S): Homo sapiens (Human)

2024-01-26 | PXD024978 | Pride

Drosophila melanogaster

Transcripts enriched in microsome fraction in ribosome-independent manner

PRJNA339298 | ENA

TMT-16plex analysis of 25 individual human liver microsome and cytosol

Comprehensive proteomic analysis for human liver microsome and human liver cytosol from 25 individual donors focusing on drug metabolising enzymes with relative quantification with TMTpro.

ORGANISM(S): Homo Sapiens (human)

2023-11-09 | PXD038055 | JPOST Repository

Culex quinquefasciatus Jpal-per strain vs. Ogasawara strain

A pyrethroid-resistant strain of Culex quinquefasciatus, JPal-per, exhibits 2500-fold greater larval resistance to permethrin than the insecticide-susceptible strain Ogasawara. An increased microsome monooxygenase metabolism is involved in the resistance mechanism. Microarray analysis revealed alter...

ORGANISM(S): Culex quinquefasciatus

2010-06-24 | E-GEOD-17326 | biostudies-arrayexpress

Liver kidney microsome antibodies. Analysis of a laboratory series.

Not available

S-EPMC9843281 | biostudies-literature

LC-HRMS-Based Identification of Transformation Products of the Drug Salinomycin Generated by Electrochemistry and Liver Microsome.

Not available

S-EPMC8868298 | biostudies-literature

ER Adaptor SCAP Translocates and Recruits IRF3 to Perinuclear Microsome Induced by Cytosolic Microbial DNAs.

Not available

S-EPMC4762662 | biostudies-literature

cross-linking mass spectrometry of synaptosome

Cross-linking mass spectrometry data of synaptosome and microsome fractions of mouse cerebellum and hippocampus.

ORGANISM(S): Mus musculus (Mouse)

2020-12-03 | PXD010317 | Pride

Synaptosome Microsome Cross-linking mass spectrometry

Label-Free Absolute Protein Quantification with Data-Independent Acquisition

Label-free absolute quantitative proteomics is commonly used for absolute quantification of the proteome or specific proteins of interest in various biological samples. Current label-free absolute protein quantification (APQ) methods determine MS1 intensities, MS2 spectral counts or intensities to a...

ORGANISM(S): Homo sapiens (Human)

2019-03-20 | PXD010912 | Pride

Human Dia S9 Absolute protein quantification Microsome Liver Dda

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242 Results

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