Mouse oocytes - OmicsDI

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Organisms

Mus musculus (498)
Homo sapiens (14)
Bos taurus (5)
Mus musculus musculus (4)
Rattus norvegicus (4)
Mesocricetus auratus (2)
Sus scrofa (2)
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mouse gut metagenome (1)

Repository

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Tissue

Oocyte (56)
Ovary (10)
Embryo (10)
Egg (4)
Early embryonic cell (4)
Cell culture (3)
Cumulus cell (2)
Adult stem cell (1)
Ovarian cumulus cell (1)
Embryonic stem cell (1)
Muscle (1)
Bone marrow (1)
Skeletal muscle (1)
Cell suspension culture (1)
Blood plasma (1)
Testis (1)
Fibroblast (1)

Disease

Disease free (3)
Infertility (1)
Hyperhomocysteinemia (1)

Technology Type

Mass Spectrometry (71)
Shotgun proteomics (40)
Bottom-up proteomics (16)
Data-independent acquisition (7)
SWATH MS (3)
Gel-based experiment (3)
Data-dependent acquisition (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Mass spectrometry assay (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
ILLUMINA, Illumina HiSeq 2000 (1)
Mass spectrometry (1)
DiaPASEF (1)
Top-down proteomics (1)

Instrument Platform

NextSeq 2000 (7)
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Illumina HiSeq 2500 (5)
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Illumina HiSeq 4000 (2)
Liquid Chromatography MS - positive - hilic (2)
Gene chip fluidic station 450 (1)
Affymetrix GeneChip Scanner 3000 7G. (1)
Illumina HiSeq X-ten (1)
VersArray ChipReader [Bio-Rad Laboratories] (1)
G2500A GeneArray scanner [Agilent Technologies] (1)
Illumina Genome Analyzer IIx (1)
GenePix 4000B [Axon Instruments] (1)
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Liquid Chromatography MS - negative - hilic (1)

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2019 (39)
2016 (35)
2014 (35)
2011 (33)
2013 (29)
2008 (27)
2020 (25)
2018 (21)
2017 (20)
2007 (18)
2010 (17)
2006 (8)
2009 (6)
2004 (2)

Metabolite Name

Thr-Pro-Arg (1)
Thr-Gly-Arg (1)
Ser-Asp-Arg (1)
Pyroglu-Asn-Arg (1)
L-valine, n-[[1-(5-fluoropentyl)-1h-indol-3-yl]carbonyl]-, methyl ester (1)
Cys-His-Arg (1)
5-methoxy-4-methyl-3-phenylcoumarin (1)
4-phenylbutan-2-ol (1)
3-quinolinecarboxamide, 1,4-dihydro-8-methoxy-4-oxo-1-pentyl-n-tricyclo[3.3.1.13,7]dec-1-yl- (1)
2-methyl-6(s)-(3-pyridyl)tetrahydro-1,2-oxazine (1)
2-furancarboxylic acid, 5-[3-[4-[2-(4-fluorophenyl)ethoxy]phenyl]propyl]- (1)
1h-indole-3-carboxylic acid, 1-(5-fluoropentyl)-, 8-quinolinyl ester (1)
[1,1':4',1''-terphenyl]-3,4'',5-triol (1)
[[4-[5r-chloro-2z-[3r-cyclohexyl-3s-hydroxy-1r-propenyl]-3s-hydroxycyclopentyl]-2r-butenyl]oxy]-acetic acid, isopropyl ester (1)
(s)-n-(1-amino-1-oxo-3-phenylpropan-2-yl)-1-pentyl-1h-indole-3-carboxamide (1)
(3as,5r,5as,8as,9ar)-5,8a-dimethyl-1-methylidene-3a,4,5,5a,6,7,9,9a-octahydroazuleno[6,7-b]furan-2,8-dione (1)
L-myo-inositol-1,4,5-triphosphate (1)
Arg-asp (1)
2-hdeahpda [dmed-fahfa] (1)
Mepirapim (1)
Glycerol trioleate (1)
Tyr-His-Arg (1)
Solasodine base + 2h, 1o, o-hex-hex-hex (1)
Cyanidin 3-o-[2''-o-(xylosyl)-6''-o-(p-o-(glucosyl)-p-coumaroyl) glucoside] 5-o-glucoside (1)
Combrestatin a4 (1)
6-oxomometasone furoate (1)
(z)-2-octylpent-2-enedioic acid (1)
Cocamidoprpylbetaine (1)
.alpha.-galactosyl-n-stearoylsphingosine (1)
Ser-Ser-Arg (1)

First Public Date

2024 (94)
2025 (82)
2014 (72)
2026 (63)
2023 (58)
2021 (50)
2022 (48)
2019 (43)
2020 (34)
2017 (27)
2018 (21)
2015 (20)
2016 (13)
2013 (13)

Study type

Transcription profiling by array (135)
RNA-seq of coding RNA (54)
Methylation profiling by high throughput sequencing (15)
RNA-seq of non coding RNA (9)
RNA-seq of coding RNA from single cells (6)
Animal - High-throughput sequencing (5)
ChIP-seq (5)
Comparative genomic hybridization by array (3)
Unknown experiment type (2)
Other (2)
Transcription profiling by high throughput sequencing (1)
Transcription profiling by SAGE (1)
RNAi profiling by array (1)
RIP-seq (1)
Methylation profiling by array (1)

Release Date

2025 (128)
2023 (119)
2022 (118)
2024 (114)
2021 (111)
2015 (106)
2020 (104)
2018 (103)
2016 (95)
2014 (90)
2019 (84)
2017 (79)
2013 (69)
2012 (69)
2008 (56)
2011 (51)
2010 (47)
2009 (36)
2007 (29)
2006 (20)
2026 (19)
2005 (18)
2003 (8)
2004 (7)
2002 (4)
2001 (4)
1999 (3)
1998 (3)
2000 (2)
1997 (1)

Lab affiliation

State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing 211166, China (4)
Reproductive Medicine Center, Department of Obstetrics and Gynecology, The First Affiliated Hospital of Anhui Medical University, No.218 Jixi Road, Hefei 230022, China (2)
Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain. (2)
State Key Laboratory of Reproductive Medicine. Department of Histology and Embryology, Nanjing Medical University, Nanjing, China (2)
Max Planck Institute for Molecular Biomedicine Bioanalytical Mass Spectrometry Röntgenstr. 20 48149 Münster Germany (2)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University (2)
Max Planck Institute for Molecular Bioemedicine, Bioanalytical Mass Spectroemtry (1)
Institute of Advanced Technology, Kindai University (1)
shang dong unversity (1)
shang dong university (1)
Shang dong university (1)
Fertility & Research Centre, School of Clinical Medicine, Faculty of Medicine & Health, University of New South Wales, Australia (1)
Department of Meiosis, Max Planck Institute for Multidisciplinary Sciences; Göttingen, Germany (1)
ChongQing Medical University (1)
Laboratory of Regulatory Mechanisms in Immunity Institute of Carcinogenesis Federal State Budgetary Institution "N. N. Blokhin National Medical Research Center of Oncology" of the Ministry of Health of the Russian Federation (1)
Proteomics platform Necker, Université Paris Cité - Structure Fédérative de Recherche Necker, INSERM US24/CNRSUAR3633, Paris 75015, France. (1)
Epigenetics Programme, Babraham Institute, Cambridge CB22 3AT, United Kingdom (1)
Babraham Institute, Cambridge, UK (1)
Center for Single-Cell Omics, School of Public Health, Shanghai Jiao Tong University Schoole of Medicine (1)
Max PLanck Institute for Molecular Biomedicine Bioanalytical Mass Spectrometry Röntgenstr. 20 48149 Münster Germany (1)
Center for Stem Cell Biology and Regenerative Medicine, MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing, China. (1)
Yale university, Department of Molecular, Cellular and Developmental Biology (1)
Protim Core Facility - Irset Inserm U1085 - UAR Biosit CNRS 3480 - INSERM 018 (1)
Key Laboratory for the Genetics of Developmental & Neuropsychiatric Disorders (Ministry of Education), Bio-X Institutes, Shanghai Jiao Tong University, Shanghai, 200240, China. (1)
Max Planck Institute for Molecular Biomedicine Biomolecular Mass Spectrometry Unit Röntgenstr. 20 D-48149 Münster Germany (1)
Chongqing Key Laboratory of Human Embryo Engineering (1)
Baylor College of Medicine, Houston, Texas, USA (1)
Chongqing Key Laboratory of Human Embryo Engineering, Center for Reproductive Medicine, Women and Children’s Hospital of Chongqing Medical University, Chongqing, China (1)
Center for Reproductive Medicine, Shandong University (1)
Max Planck Institute for Molecular Biomedicine, Bioanalytical Mass Spectrometry, Röntgenstr. 20, D-48149 Münster Germany (1)

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Gut microbiota-modulated glutamic acid rejuvenates the quality of oocytes deteriorated by advanced reproductive age

The gut microbiota plays a vital role in maintaining the physiological function of host health and the pathogenesis of various diseases. However, its relationship with maternal age-associated decline in oocyte quality remains elusive. Here, we report that establishment of gut microbiota from youn...

2026-05-07 | MTBLS14062 | MetaboLights

Proteomic-based identification of oocyte maturation-related proteins in mouse GV oocytes

In this study, we applied 1D SDS-PAGE and RP-LC-MS/MS to investigate the proteins stored in GV mouse oocytes. This high-performance strategy allowed us to define a set of 1405 different mouse GV oocyte proteins. It is confirmed that this study will help us to understand the diverse biological proces...

ORGANISM(S): Mus musculus (Mouse)

2020-09-17 | PXD014314 | Pride

Mouse Gv oocytes Lc-ms/ms

Gene expression profile of Dicer-deficient oocytes

Small RNAs, such as miRNAs and siRNAs, are involved in gene regulation in a variety of systems, including mouse oocytes. Dicer is a ribonuclease III enzyme essential for miRNA and siRNA biosynthesis. In an effort to uncover the function of small RNAs during oocyte growth, we specifically deleted Dic...

ORGANISM(S): Mus musculus

2010-04-06 | E-GEOD-17985 | biostudies-arrayexpress

Transcription profiling of mouse oocytes reveals abundant transcripts from retrotransposons are unstable

One physiological function proposed for RNA interference (RNAi) is to constrain expression of repetitive elements and thereby reduce the incidence of retrotransposition. Consistent with this model is that inhibiting the RNAi pathway results in an increase in expression of repetitive elements in pre...

ORGANISM(S): Mus musculus

2008-06-13 | E-GEOD-4508 | biostudies-arrayexpress

Quantitative proteomics analysis of RPL12 mutant and WT mouse oocytes

RPL12 mutant MII oocytes in 5 replicates and wildtype control in 6 replicates were analyzed using DIA-based protein quantification technology.

ORGANISM(S): Mus musculus (Mouse)

2025-05-06 | PXD050652 | Pride

Quantitative proteomics Mouse Rpl12 Dia Oocyte

DIA-based protein quantification of mouse oocytes from five developmental stages.

The oocytes in 6 replicates from five stages were analyzed using DIA-based protein quantification technology.

ORGANISM(S): Mus musculus (Mouse)

2025-01-29 | PXD050840 | Pride

Mouse oocytes Dia

Two-cell developmental block is due to the lack of cytoplasmic lattices in mouse antral oocytes

Mammalian oogenesis is a complex mechanism entailing the maturation of primordial follicles into preovulatory follicles followed by the release of antral oocytes. In the ovary, the antral compartment consists of two populations of oocytes whose main difference regards the ability to resume meiosis a...

ORGANISM(S): Mus musculus

2013-02-04 | E-GEOD-34671 | biostudies-arrayexpress

Transcription profiling of immature germinal vesicle stage oocytes with mature metaphase II oocytes to identify and characterize the changed and stable transcripts during mouse oocyte maturation.

There is massive destruction of transcripts during maturation of mouse oocytes. The objective of this project was to identify and characterize the transcripts that are degraded versus those that are stable during the transcriptionally silent germinal vesicle (GV)-stage to metaphase II (MII)-stage t...

ORGANISM(S): Mus musculus

2007-11-13 | E-GEOD-5668 | biostudies-arrayexpress

Proteome analysis of aged mouse oocytes

The proteome changes were quantified in aged mouse oocytes using TMT 6-plex by LC-MS/MS.

ORGANISM(S): Mus musculus (Mouse)

2022-02-16 | PXD023603 | Pride

Tmt Mouse Oocyte Proteomics. Aging

Maternal age effect on mouse oocytes: new biological insight from proteomic analysis

The long-standing view of 'immortal germ line versus mortal soma' poses a fundamental question in biology concerning how oocytes age in molecular terms. A mainstream hypothesis is that maternal aging of oocytes has its roots in gene transcription. Investigating the proteins resulting from mRNA trans...

ORGANISM(S): Mus musculus

2014-04-15 | E-GEOD-42959 | biostudies-arrayexpress

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