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UnknownLC-IMS-MS Feature Finder: detecting multidimensional liquid chromatography, ion mobility and mass spectrometry features in complex datasets.
Not available
S-EPMC3799467 | biostudies-literature
UnknownOff-Line Multidimensional Liquid Chromatography and Auto Sampling Result in Sample Loss in LC/LC-MS/MS.
Not available
S-EPMC4123945 | biostudies-literature
OtherDeep Proteomic Profiling of Human Carotid Atherosclerotic Plaques Using Multidimensional LC-MS/MS
Data from PeptideAtlas, [[http://www.peptideatlas.org/PASS/PASS00406 PASS00406]]. Experiment: HPL_Human_Plaque_BR2_TR1, file: 130801_HPL_Human_Plaque_BR2_TR1_16.mzml. From PeptideAtlas: {{i}} Thirty eight human carotid atherosclerotic plaques were pooled into two samples and analyzed in triplicate u...
ORGANISM(S): Homo_sapiens_viruses, Human 
GPM11210025456 | GPMDB
UnknownComparison of extensive protein fractionation and repetitive LC-MS/MS analyses on depth of analysis for complex proteomes.
Not available
S-EPMC2870931 | biostudies-literature
ProteomicsT. pseudoethanolicus response to furfural stress - LC-MS/MS
Identification of the furfural detoxifying machinery in T. pseudoethanolicus (Tps) by LC-MS/MS based proteomics for engineering cellulolytic microbes involved in bioethanol production.
ORGANISM(S): Thermoanaerobacter pseudethanolicus 
2018-10-19 | PXD001446 | Pride
Furfural Tps Stress Proteomics. Lc-ms/ms 
UnknownAlignstein: Optimal transport for improved LC-MS retention time alignment.
Not available
S-EPMC9633278 | biostudies-literature
UnknownMultidimensional Separation Using HILIC and SCX Pre-fractionation for RP LC-MS/MS Platform with Automated Exclusion List-based MS Data Acquisition with Increased Protein Quantification.
Not available
S-EPMC4720167 | biostudies-literature
UnknownComparative informatics analysis to evaluate site-specific protein oxidation in multidimensional LC-MS/MS data.
Not available
S-EPMC3747030 | biostudies-literature
ProteomicsTriflic acid-treatment enables LC-MS/MS analysis of insoluble bacterial biomass
Established bacterial proteome sample preparations, including sonication and bead beating, leave insoluble carbohydrate-rich cell envelope pellets with an abundance of vital proteins often overlooked or missed in LC-MS/MS analyses. Triflic acid selectively removes glycans and we demonstrate that in ...
ORGANISM(S): Homo sapiens (Human) Pseudomonas aeruginosa PAO1 Bacillus subtilis 
2019-01-29 | PXD009004 | Pride
Lc-ms/ms Microbiome Bacteria Triflic acid 
ProteomicsMultiple solvent elution, a method to counter the effects of Co-Elution and Ion Suppression of peptides in LC-MS analysis.
The abundance of proteins in the cellular proteome ranges from millions of copies to one copy per cell. This wide dynamic range represents a major challenge in proteomic analysis. On average, any human cell type expresses up to approximately 10.000 different protein coding genes that are used to syn...
ORGANISM(S): Homo sapiens (Human) 
2019-06-28 | PXD011908 | Pride
Proteome coverage Co-elution Lc-ms Proteomics Solvents Ion suppression 
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