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MetabolomicsMetabolic profiling of plasma collected from Peromyscus leucopus and Mus musculus following LPS treatment
Not available
ORGANISM(S): Mus musculus;Peromyscus leucopus 
ST001654 | MetabolomicsWorkbench
TranscriptomicsGenome-wide analysis of alternative splicing evolution among Mus subspecies
We studied the evolution of alternative splicing in the early stages of species divergence in the house mouse. We sequenced the testis transcriptomes of three Mus musculus subspecies and Mus spretus using Illumina technology. On the basis of a genome-wide analysis of read coverage differences among ...
ORGANISM(S): Mus musculus domesticus 
2010-02-28 | E-GEOD-18905 | biostudies-arrayexpress
TranscriptomicsRNA-seq analysis of Mus caroli and Mus pahari
We performed RNA-seq experiments Mus caroli and Mus pahari to aid in annotating their genomes. RNA was extracted from multiple tissues: brain, liver, heart and kidney. Complementary ChIP-seq data in this study have also been deposited in ArrayExpress, under accesison number E-MTAB-5769 ( https://ww...
ORGANISM(S): Mus caroli 
2018-03-06 | E-MTAB-5768 | biostudies-arrayexpress
no omics definedTranscription profiling by array of testis from four Mus musculus species to study the differential gene expression
RNA from testis from 4 mus musculus species was hybridized on affymetrix gene chip U74Av2. Subspecies-specific differences in expression level were then extracted by conditioning on outcomes to cases where the expression in one subspecies differed significantly from all others but these did not diff...
ORGANISM(S): Mus musculus castaneus 
2007-12-01 | E-GEOD-2471 | biostudies-arrayexpress
TranscriptomicsContrasting patterns of expression divergence in early and late stages of population divergence in mice
We compared gene expression differences in the polytypic species complex Mus musculus (Mus musculus musculus, Mus musculus domesticus, Mus musculus castaneus and Mus musculus ssp) with that of Mus spretus via oligonucleotide microarrays representing more than 20,000 genes. Analysis of the results by...
ORGANISM(S): Mus spretus 
2010-06-30 | E-GEOD-2597 | biostudies-arrayexpress
ProteomicsProtein correlation of Mus musculus tissues
SILAC based protein correlation profiling using size exclusion of protein complexes derived from Mus musculus tissues (Heart, Liver, Lung, Kidney, Skeletal Muscle, Thymus)
ORGANISM(S): Mus musculus (Mouse) 
2021-05-05 | PXD022309 | Pride
Mouse Silam Lcmsms 
ProteomicsProtein correlation of Mus musculus tissues
SILAC based protein correlation profiling using size exclusion of protein complexes derived from seven Mus musculus tissues (Heart, Brain, Liver, Lung, Kidney, Skeletal Muscle, Thymus)
ORGANISM(S): Mus musculus (Mouse) 
2018-04-24 | PXD007288 | Pride
Interactomes Silac Pcp Interactions 
TranscriptomicsChIP-seq analyses of CTCF binding in liver samples from CAST/EiJ and SPRET/EiJ (Mus spretus) mice, and of the cohesin subunit RAD21 in C57BL/6J mouse liver
We explored the relationship between the evolutionary dynamics of CTCF binding and the functional stability of higher order genome structures, by performing ChIP-seq experiments in closely related Mus species or strains and intersecting with Hi-C-derived topologically associating domains (TADs) and ...
ORGANISM(S): Mus musculus domesticus 
2019-11-20 | E-MTAB-8014 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse interspecific recombinant testis
Analysis of the genomic expression profiles in Interspecific recombinant Congenic Strains starting from a Mus msuculus x mus spretus cross.
ORGANISM(S): Mus musculus x Mus spretus 
2008-08-31 | E-TABM-444 | biostudies-arrayexpress
TranscriptomicsRNA-seq data from liver tissues of Mus spretus (SPRET/EiJ) and Mus caroli (Caroli/EiJ)
Illumina RNA-seq data of liver samples from Mus spretus (SPRET/EiJ) and Mus caroli (Caroli/EiJ)
ORGANISM(S): Mus caroli 
2014-08-20 | E-MTAB-2483 | biostudies-arrayexpress
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