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ProteomicsN-glycosite mapping in Brugia malayi female worms, male worms, and microfilariae
N-linked glycosylation is a critical post translational modification of eukaryotic proteins. N-linked glycans are present on surface and secreted filarial proteins that play a role in host parasite interactions. Examples of glycosylated Brugia malayi proteins have been previously identified but ther...
ORGANISM(S): Brugia malayi 
2023-04-23 | PXD039002 | Pride
Lc-msms N-glyco fasp Filarial parasite 
ProteomicsDeep membrane proteome profiling of high-risk human paraganglioma
We combined glycopeptide enrichment by N-glyco-FASP (Zielinska et al., 2010), SPEG (Tian et al., 2007) with a hydrophobic segment-oriented hpTC method (Vít et al 2016) and a standard “detergent and trypsin” approach into a tree-pronged “Pitchfork” strategy for the analysis of membrane proteome in hi...
ORGANISM(S): Homo sapiens (Human) 
2021-11-25 | PXD029344 | Pride
Lc-msms Paraganglioma Membrane proteome Human Pitchfork strategy 
UnknownN-linked glycosylation enrichment for in-depth cell surface proteomics of diffuse large B-cell lymphoma subtypes.
Not available
S-EPMC3879617 | biostudies-literature
ProteomicsN-linked glycosylation enrichment for in-depth cell surface proteomics and the classification of diffuse large B-cell lymphoma subtypes
The classification of histologically similar yet molecularly distinct tumors into specific subtypes remains a clinically challenging task. Classification of such tumors into distinct entities based on their cell surface protein expression profiles has been hindered by the lack of an unbiased global...
ORGANISM(S): Homo sapiens (Human) 
2016-08-25 | PXD000332 | Pride
N-linked glycosylation Diffuse large b-cell lymphoma Glycoproteome 
ProteomicsProtein N-glycosylation is sex-related in Nilaparvata lugens adults
Nilaparvata lugens, or the brown planthopper, is one of the most notorious pest insects of cultured rice, and a model for hemimetabolous development. Recently, the N-glycome of N. lugens was explored throughout post-embryonic development and reproductive stages, which revealed differential protein N...
ORGANISM(S): Nilaparvata lugens 
2020-01-16 | PXD013657 | Pride
Nilaparvata lugens Pest insect N-glycosylation sites N-linked glycosylation 
UnknownDefining the filarial N-glycoproteome by glycosite mapping in the human parasitic nematode Brugia malayi.
Not available
S-EPMC10187950 | biostudies-literature
UnknownIn-Depth Mapping of the Urinary N-Glycoproteome: Distinct Signatures of ccRCC-related Progression.
Not available
S-EPMC7016614 | biostudies-literature
Proteomicsurinary glycopeptide profile differentiates early cardiorenal risk in subjects not meeting criteria for chronic kidney disease
Early diagnosis and treatment of chronic kidney disease (CKD) is a worldwide challenge. Albuminuria is defined as urinary albumin:creatinine ratio (ACR) ≥30 mg/g. Subjects with ACR values below this cut-off and preserved renal function are considered at no cardiorenal risk, but increased risk is est...
ORGANISM(S): Homo sapiens (Human) 
2025-06-02 | PXD049688 | Pride
Urine  glycopeptide  chronic kidney disease  early cardiorenal risk albuminuria 
ProteomicsLarge-Scale Profiling of Protein Methylation
Develop a novel de-glyco-assisted methylation site identification (DOMAIN) strategy which enables straightforward, fast, and reproducible analysis of protein methylation in a proteome-wide manner. Combining multidimensional fractionation and multiprotease digestion, our method enabled the identifica...
ORGANISM(S): Homo sapiens (Human) 
2019-07-18 | PXD014574 | Pride
Methylation Hydrophilic Mutliprotease Lysarginase 
ProteomicsComprehensive proteomic characterization identifies potential molecular targets for therapy and imaging in the Cluster 1 human pheochromocytoma and paraganglioma
In order to identify new proteins with a potential to become targets for therapy or tumor imaging in pheochromocytoma and paraganglioma, we performed detailed proteomic analysis of 22 well-characterized human PPGL samples and normal chromaffin tissue from adrenal medulla. A standard quantitative pro...
ORGANISM(S): Homo sapiens (Human) 
2023-09-25 | PXD039788 | Pride
Surface proteins Pheochromocytoma Paraganglioma Pitchfork strategy Membrane proteome Human 
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