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ProteomicsSolid-phase extraction of N-linked glycans and glycosite-containing peptides (NGAG) for comprehensive characterization of glycoproteins
A novel chemoenzymatic method termed solid phase extraction of N-linked Glycans And Glycosite-containing peptides (NGAG) for the simultaneous analysis of N-glycans, glycosite-containing peptides, and intact N-glycopeptides with site-specific glycosylation information.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-31 | MSV000080840 | MassIVE
ProteomicsHuman serum N-linked intact glycopeptides LC-MS/MS
Large-scale identification of N-linked intact glycopeptides by liquid chromatography coupled tandem mass spectrometry (LC-MS/MS) in human serum is challenging due to the wide dynamic range of serum protein abundances, the lack of a complete serum N-Glycan database and the existence of non-specifical...
ORGANISM(S): Armoracia rusticana Homo sapiens (Human) Gallus gallus (Chicken) 
2020-04-21 | PXD015622 | Pride
N-linked intact glycopeptide Co-elution Spectral library search Human serum Isotopic distribution 
ProteomicsIn-depth site-specific O-glycosylation analysis of glycoproteins and endogenous peptides in cerebrospinal fluid (CSF) from healthy individual mild cognitive impairment (MCI) and Alzheimer disease (AD) patients
Site-specific O-glycoproteome mapping in complex biological system provides molecular basis for understanding the structure-function relationships of glycoproteins and their roles in physiological and pathological processes. Previous O-glycoproteome analysis in cerebrospinal fluid (CSF) focused on s...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-04-05 | MSV000087160 | MassIVE
ProteomicsSite specific N-linked glycosylation analysis of spike proteins of SARS-CoV, MERS-CoV, HCoV-HKU1, HCoV-NL63, and HCoV-229E
Site specific N-linked glycosylation analysis of spike proteins of SARS-CoV, MERS-CoV, HCoV-HKU1, HCoV-NL63, and HCoV-229E
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
MSV000092889 | MassIVE
ProteomicsSynaptic transmission induces site specific changes in sialylation on N-linked glycoproteins in nerve terminals
Synaptic transmission is an ultra-fast process that aims at transducing a signal from one neuron to another neuron or cell by the release of neurotransmitters. This process requires rapid response which can be transmitted through fast molecular switches such as post-translational modifications of pr...
ORGANISM(S): Rattus norvegicus (Rat) 
2020-06-12 | PXD016230 | Pride
Synaptic transmission Sialic acid N-glycosylation Rat Synaptosomes Lc-ms/ms 
ProteomicsLarge scale intact glycopeptide identification by Mascot database search
We present the adaptability of Mascot search engine for automated identification of intact glycopeptide mass spectra. The steps involved in adopting Mascot for intact glycopeptide analysis include: i) assigning unique one letter codes for monosaccharides, ii) linearizing glycan sequences and iii) pr...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2018-07-02 | MSV000082567 | MassIVE
ProteomicsN-Linked Glycoprotein Profiles of Human Breast Normal/Benign Cell Lines
Secreted proteins and transmembrane proteins with extracellular domains are frequently glycosylated; this group of proteins includes those that participate in the various intercellular junctions and signaling pathways of an epithelium. In this study we characterized the differences in glycoprotein ...
ORGANISM(S): Homo sapiens (Human) 
2017-03-23 | PXD005339 | Pride
Human Breast Lc-msms Cell line N-linked Glycoprotein 
ProteomicsN-GlycositeAtlas, a database resource for mass spectrometry-based human N-linked glycoproteins and glycosylation sites
N-Linked glycoprotein is a highly interesting class of proteins for clinical and biological research. The large-scale characterization of N-linked glycoproteins accomplished by mass spectrometry-based glycoproteomics has provided valuable insights into the interdependence of glycoprotein structure a...
ORGANISM(S): Homo sapiens (Human) 
2019-11-08 | PXD005143 | Pride
Mass spectrometry Glycoprotein Protein glycosylation Database Glycoproteome 
ProteomicsSolid-phase extraction of N-linked glycans and glycosite-containing peptides (NGAG) for comprehensive characterization of glycoproteins
A novel chemoenzymatic method termed solid phase extraction of N-linked Glycans And Glycosite-containing peptides (NGAG) for the simultaneous analysis of N-glycans, glycosite-containing peptides, and intact N-glycopeptides with site-specific glycosylation information.
ORGANISM(S): Homo sapiens (Human) 
2015-11-23 | PXD001571 | Pride
Lc-msms Glycosylation Deglycopeptide Glycosites Speg Spegag 
ProteomicsN-Linked Glycoprotein Profiles of Human Breast Luminal Malignant Cell Lines
Secreted proteins and transmembrane proteins with extracellular domains are frequently glycosylated; this group of proteins includes those that participate in the various intercellular junctions and signaling pathways of an epithelium. In this study we characterized the differences in glycoprotein ...
ORGANISM(S): Homo sapiens (Human) 
2017-03-22 | PXD005390 | Pride
Human Breast Lc-msms Cell line Luminal N-linked Glycoprotein 
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