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ProteomicsA novel strategy of profiling protein methylation on lysine and arginine
Protein methylation is involved in different processes including gene expression regulation, epigenetics, and nucleotide metabolism. Identification of methylated proteins is difficult as methyl groups are small, and do not introduce significant changes in protein hydrophobicity or charge state. The ...
ORGANISM(S): Homo sapiens (Human) 
2016-08-16 | PXD001689 | Pride
Methylation 
ProteomicsIn-vitro culture of single gut bacterial strains with added sugars
Gut commensal bacterial strains were cultured with or without added sugars (glucose, sucrose and kestose). The base culture medium without sugar added were modified based on the Yeast Casitone Fatty Acids (YCFA) broth. Samples were analyzed for proteomics using LC-MS/MS.
ORGANISM(S): Blautia hydrogenotrophica DSM 10507 Bacteroides thetaiotaomicron Escherichia coli Phocaeicola vulgatus ATCC 8482 Bacteroides uniformis ATCC 8492 Bacteroides ovatus ATCC 8483 
2023-06-08 | PXD037923 | Pride
Proteomics Single strains Culturing 
ProteomicsAssociations between cellular energy and pediatric inflammatory bowel disease patient response to treatment
Crohn’s disease (CD) and ulcerative colitis are chronic inflammatory bowel diseases (IBD) of which the etiology and pathogenesis are not completely understood. In paediatric patients, the disease tends to be more severe and aggressive then in adults. Here, we perform a proteomic approach on ascendin...
ORGANISM(S): Homo sapiens (Human) 
2021-08-26 | PXD024229 | Pride
Inflammatory bowel disease Proteomics Pediatric 
ProteomicsM.musculus - Suprachiasmatic nucleus, iBAQ (Chiangetal,plosgenetics.2014)
abundance based on iBAQ, Interaction consistency score: 15.5, Coverage: 18
ORGANISM(S): 10090 
2014-00-00 | 1300563876 | PAXDB
ProteomicsGlobal quantification of glutathione S-transferases in human serum using LC-MS/MS coupled with affinity enrichment
The concentrations of glutathione S-transferases (GSTs) in serum are considered disease biomarkers. Members of the GST superfamily often exhibit functional overlap, and can compensate for each other. Global and quantitative evaluation of serum GSTs is therefore urgent, but we currently lack an effic...
ORGANISM(S): Homo Sapiens 
2022-01-19 | PXD031061 |
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