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ProteomicsProfiling of fasting-feeding dynamics in mouse liver
Daily biological rhythms are orchestrated by a combination of the intrinsic circadian clock and external food/feeding-related signals which influence metabolism in health and disease. Understanding how and to which extent both circadian and fasting/feeding rhythms contribute to regulating daily phys...
ORGANISM(S): Mus musculus (Mouse) 
2021-01-22 | PXD008944 | Pride
Metabolism Mouse Fasting Liver 1d-lc-msms Online 2d-lc-msms Feeding 
ProteomicsComparative proteomic analysis of root tubers of Rehmannia glutinosa at different growth stages
In this study, roots of Rehmannia glutinosa were used as experimental material, and three tuber roots of Rehmannia glutinosa in extension stage (I), expansion stage (E) and mature stage (M) were selected as samples, The iTRAQ quantitative proteomic technology combined with two-dimensional liquid chr...
ORGANISM(S): Rehmannia glutinosa 
2022-02-17 | PXD025914 | Pride
Three different growth stages Root Rehmannia glutinosa Lc-msms 
UnknownQuantitative serum proteomics using dual stable isotope coding and nano LC-MS/MSMS.
Not available
S-EPMC4684172 | biostudies-literature
ProteomicsMouse retina LC-MSMS - Diurnal expression of proteins in the retina of the blind cone-rod homeobox (Crx(-/-) ) mouse and the 129/Sv mouse: a proteomic study
To investigate the role of the circadian clock of the photoreceptor cells in regulation of retinal protein rhythms, we have analyzed diurnal protein expression in the photoreceptor-deficient cone-rod homeobox knock out mouse (Crx-/-). Retinal homogenates of 129/sv and Crx-/- mice were analysed by 2D...
ORGANISM(S): Mus musculus (Mouse) 
2017-04-04 | PXD005556 | Pride
Lc-msms Retina Mouse 2d-page 
Proteomicsequine CD4+ T cells show changed membrane protein expression in autoimmune uveitis
Through this comparative proteomic study of equine CD4+ cells 376 membrane proteins could be identified. Several proteins showed changed abundance in horses affected by a spontaneous autoimmune disease (equine recurrent uveitis, ERU). Findings provide novel knowledge about changes in the CD4+ immune...
ORGANISM(S): Equus caballus (Horse) 
2017-01-09 | PXD005384 | Pride
Lc-msms mass spectrometry analysis Membrane proteins Cd4+ t cells Autoimmune uveitis Equine recurrent uveitis 
ProteomicsThe C. elegans proteome response to alternative food source bacteria
Understanding how C. elegans interacts with the bacteria it feeds upon enables us to better comprehend the complex interactions occurring at the interface of host and microbe. Here we have assessed the proteome of C. elegans after growth on bacteria capable of colonising the gut via a comparative an...
ORGANISM(S): Caenorhabditis elegans 
2018-03-13 | PXD008105 | Pride
Caenorhabditis elegans 2d lc-msms Isobaric labelling 
ProteomicsHigh productivity in hybrid-poplar trees without isoprene emission to the atmosphere
The use of hybrid-poplar tree plantations as a source for biofuels and biomass production in temperate regions of the Northern Hemisphere has also, unintentionally, increased forest isoprene emissions to the atmosphere. The consequences of increased isoprene emissions include higher rates of troposp...
ORGANISM(S): Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) 
2020-01-13 | PXD013252 | Pride
Lc-msms Poplar Isoprene 
ProteomicsLinking microbial community structure and function during the anaerobic digestion of grass
In this study, microbial communities from triplicate leach-bed anaerobic bioreactors digesting grass were analysed. Each reactor comprised two microbial fractions, one immobilized on grass (biofilm) and the other in a planktonic state present in the leachate. Microbial communities from the two fract...
ORGANISM(S): anaerobic digester metagenome 
2018-10-23 | PXD007956 | Pride
Anaerobic digestion  metaproteomics  grass 
ProteomicsUnbiased proteomic study of the axons of cultured rat cortical neurons
We have conducted quantitative proteomic analyses of the axons of cultured rat cortical neurons. Axons are isolated by using glass chips that enable the axons and their cell bodies of neurons to grow in separated regions on the chip surface. Proteins extracted from the isolated axons, as well as tho...
ORGANISM(S): Rattus norvegicus (Rat) 
2018-04-17 | PXD005527 | Pride
Rat Axon Label-free quantification 2d-lc-msms Dimethyl-labeling quantitative proteomics 
ProteomicsBHK-21 cell iTRAQ - Proteome analysis of Duck Tembusu virus (DTMUV)-infected BHK-21 cells
Duck Tembusu virus (DTMUV) is a newly emerging pathogenic flavivirus that has caused huge economic losses to the duck industry in China since 2010. Moreover, DTMUV can also infect geese, chickens, house sparrows and replicate in in the brain, spleen, liver and kidneys of BALB/c mice, which poses pub...
ORGANISM(S): Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus) 
2017-05-23 | PXD005731 | Pride
Dtmuv infection Itraq Bhk-21 cell 
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