Osmolarity - OmicsDI

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CHEBI ID

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Metabolite Name

Histamin (1)
Uranidine (1)
Stryphnusin (1)
Cyclo Pro-Arg (1)
Ianthelline (1)
8,9-dihydrobarettin (1)
6-bromo-8-hydroxy-conicamin (1)
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L6-bromohypaphorine (1)
Geobarrettin C (1)
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Naringenin 7'-O-glucuronide (1)
SM C22:3 (1)
PC aa C38:1 (1)
PC aa C30:2 (1)
PE(12:0/16:0) (1)
Ergosta-5,7,24(28)-trien-3beta-ol (1)
SM C26:1 (1)
SM C26:0 (1)
SM C24:1 (1)
SM C24:0 (1)
SM C20:2 (1)
SM C18:1 (1)
SM C18:0 (1)
SM C16:0 (1)
SM (OH) C24:1 (1)

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Modelling Approach

Ordinary differential equation model (2)
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Lab affiliation

Department for Biochemistry, Max F. Perutz Laboratories, University of Vienna, Dr. Bohr-Gasse 9, A-1030 (7)
RNA Biology Group, Cancer Research UK Manchester Institute, The University of Manchester, Wilmslow Road, Manchester M20 4BX, United Kingdom. (1)
Research Core Unit Proteomics and Institute of Toxicology, Hannover Medical School, Hannover, Germany (1)
University Medical Center of the Johannes-Gutenberg University Mainz (1)
Jens Nielsen, PhD, Dr. Tech. Professor Director of Systems and Synthetic Biology Chief Scientific Officer Novo Nordisk Foundation Center for Biosustainability Systems and Synthetic Biology Chalmers University of Technology Kemivägen 10 SE-412 96 Göteborg SWEDEN (1)
Departamento de Biología Molecular y Biotecnología, Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de México, Cd. Universitaria, Coyoacán, Ciudad de México, México (1)
MRC Laboratory of Molecular Biology, Francis Crick Avenue,Cambridge, UK (1)
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State Key Laboratory of Medical Proteomics, CAS Key Laboratory of Separation Sciences for Analytical Chemistry, National Chromatographic R&A Center, Dalian Institute of Chemical Physics, Chinese Academy of Sciences (CAS), Dalian, 116023, China (1)
Indian Council of Medical Research, Regional Medical Research Centre, Dollygunj, Port Blair - 744 103, Andaman & Nicobar Islands,INDIA. Phone: Office: +91-3192-251158 Cell: +91-9434284576 (1)
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Laboratorio C036, Departamento Biología Molecular y Biotecnología, Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de México (UNAM), Ciudad Universitaria, Ciudad de México, México (1)
IMol Polish Academy of Sciences, Flisa 6, 02-247 Warsaw, Poland (1)
Department of Internal Medicine, Gerontology and Geriatric Medicine, Wake Forest University School of Medicine, Winston-Salem, NC 27157, United States (1)
Institute of Microbiology, Department of Microbial Physiology and Molecular Biology Ernst-Moritz-Arndt-University Greifswald Felix-Hausdorff-Straße 8 17489 Greifswald (1)
Equipe BRICS, Laboratoire PBS UMR 6270 CNRS, Université de Rouen (1)
IMol Polish Academy of Sciences, Warsaw, Poland (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, Utrecht 3584 CH, the Netherlands and Netherlands Proteomics Center, Padualaan 8, Utrecht 3584 CH, the Netherlands (1)
Luxembourg institute of Science and Technology Environmental research and Technology Environmental Resarch and Technolgy Platform (1)

IsPrivate

False (3)

Model Flag

Non Kinetic (1)

Classification

bacteria (14)
fungi (5)

Study type

Transcription profiling by array (43)
RNA-seq of coding RNA (12)
Unknown experiment type (2)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
Other (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

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Transcription profiling of human intervertebral disc cells treated with varying osmolarity growth medium

Human intervertebral disc tissue was obtained from patients (average age 51 yrs) undergoing surgery for lumbar interbody fusion (n=3) or lumbar disc herniation (n=1). Cells were isolated by sequential pronase-collagenase digestion [3]. Cells were passaged twice in monolayer and suspended at a densit...

ORGANISM(S): Homo sapiens

2007-08-13 | E-GEOD-1648 | biostudies-arrayexpress

Gene regulation by the RcsCB two-component system and the auxiliary protein TviA in S. Typhi

In response to osmolarity, Salmonella enterica serotype Typhi (S. Typhi) regulates genes required for Vi capsular antigen expression oppositely to those required for motility and invasion. Previous studies suggest that osmoregulation of motility, invasion and capsule expression is mediated through t...

ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhi

2010-05-18 | E-GEOD-15752 | biostudies-arrayexpress

osmolarity induces hESC difference in several aspects

PRJNA985223 | ENA

Tear osmolarity and dry eye symptoms in diabetics.

Not available

S-EPMC3956735 | biostudies-literature

An SLC12A9-dependent ion transport mechanism regulates lysosomal osmolarity

PRJNA1158457 | ENA

Impact of temporal tear meniscus height on the tear osmolarity measurements.

Not available

S-EPMC12304470 | biostudies-literature