Otto E C EC - OmicsDI

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Unknown (70)
Transcriptomics (8)
Proteomics (3)
Metabolomics (1)

Organisms

Homo sapiens (6)
Mus musculus (3)
Acyrthosiphon pisum (1)
environmental samples (1)

Repository

biostudies-arrayexpress (8)
pride (3)
MetaboLights (1)

Tissue

Cell culture (1)
Permanent cell line cell (1)

Technology Type

Mass Spectrometry (3)
Shotgun proteomics (3)
Mass spectrometry (1)

Instrument Platform

Illumina HiSeq 2500 (3)
NextSeq 500 (2)
FACSAria III (1)
Flow injection analysis MS - negative (1)

Publication Date

2026 (3)
2012 (3)
2019 (2)
2016 (2)
2025 (1)
2024 (1)

CHEBI ID

CHEBI:102524; HMDB0014386; HMDB14386 (1)
CHEBI:1050862; HMDB0013696; HMDB0032997; HMDB0032999; HMDB13696; HMDB32997; HMDB32999 (1)
CHEBI:10979; HMDB0032418; HMDB0032422; HMDB32418; HMDB32422 (1)
CHEBI:110179; CHEBI:132606; HMDB0030767; HMDB0037774; HMDB0037775; HMDB0094645; HMDB30767; HMDB37774; HMDB37775; HMDB94645 (1)
CHEBI:1178473; HMDB0031339; HMDB0032968; HMDB0032969; HMDB0032970; HMDB31339; HMDB32968; HMDB32969; HMDB32970 (1)
CHEBI:132607; HMDB0030555; HMDB0094679; HMDB30555; HMDB94679 (1)
CHEBI:132854; HMDB0032662; HMDB0036029; HMDB0037179; HMDB32662; HMDB36029; HMDB37179 (1)
CHEBI:133460; HMDB0060013; HMDB60013 (1)
CHEBI:133815; HMDB0030856; HMDB0040140; HMDB30856; HMDB40140 (1)
CHEBI:167099; HMDB0034413; HMDB0040578; HMDB34413; HMDB40578 (1)
CHEBI:17976; HMDB0033197; HMDB0036047; HMDB0059661; HMDB33197; HMDB36047; HMDB59661 (1)
CHEBI:20607; HMDB0000982; HMDB0039229; HMDB00982; HMDB39229 (1)
CHEBI:239286; HMDB0015200; HMDB15200 (1)
CHEBI:246417; HMDB0029717; HMDB29717 (1)
CHEBI:256036; HMDB0029742; HMDB0031860; HMDB0032933; HMDB29742; HMDB31860; HMDB32933 (1)
CHEBI:26308; CHEBI:87281; CHEBI:87503; HMDB0031717; HMDB0032271; HMDB0032410; HMDB0032495; HMDB0036193; HMDB0037619; HMDB0038299; HMDB0039653; HMDB0040413; HMDB0041306; HMDB31717; HMDB32271; HMDB32410; HMDB32495; HMDB36193; HMDB37619; HMDB38299; HMDB39653; HMDB40413; HMDB41306 (1)
CHEBI:3395; CHEBI:73508; HMDB0014336; HMDB0028827; HMDB0028864; HMDB0029157; HMDB0029439; HMDB14336; HMDB28827; HMDB28864; HMDB29157; HMDB29439 (1)
CHEBI:356329; CHEBI:356660; HMDB0000721; HMDB0011178; HMDB00721; HMDB11178 (1)
CHEBI:356659; HMDB0011174; HMDB0011175; HMDB0028915; HMDB0028937; HMDB11174; HMDB11175; HMDB28915; HMDB28937 (1)
CHEBI:37270; HMDB0010730; HMDB0030982; HMDB0032370; HMDB10730; HMDB30982; HMDB32370 (1)
CHEBI:385866; HMDB0000706; HMDB0011167; HMDB0028760; HMDB0028991; HMDB00706; HMDB06113; HMDB11167; HMDB28760; HMDB28991 (1)
CHEBI:417823; HMDB0030965; HMDB0037517; HMDB30965; HMDB37517 (1)
CHEBI:42334; HMDB0062295; HMDB62295 (1)
CHEBI:43355; HMDB0000682; HMDB00682; HMDB03309 (1)
CHEBI:479286; HMDB0013631; HMDB13631 (1)
CHEBI:479320; HMDB0013308; HMDB0062338; HMDB13308; HMDB62338 (1)
CHEBI:48498; HMDB0029726; HMDB0033746; HMDB29726; HMDB33746 (1)
CHEBI:48983; HMDB0032717; HMDB0033437; HMDB32717; HMDB33437 (1)
CHEBI:50091; HMDB0004645; HMDB04645 (1)
CHEBI:51041; HMDB0014797; HMDB14797 (1)

Metabolite Name

(+)-(1R,2R)-1,2-Diphenylethane-1,2-diol (1)
(+/-)-6-Acetonyldihydrochelerythrine (1)
(-)-Nopol (1)
(-)-trans-Carveol (1)
(10S,11S)-Pterosin C (1)
(1E,3E)-4-Hydroxybuta-1,3-diene-1,2,4-tricarboxylate (1)
(2-hydroxy-2-{9-hydroxy-7-oxo-2H,3H,7H-furo[3,2-g]chromen-2-yl}propoxy)sulf... (1)
(22Alpha)-hydroxy-campest-4-en-3-one (1)
(3''x,5''a,9''x,10''b)-O-(3-Hydroxy-6-oxo-7-drimen-11-yl)umbelliferone (1)
(3R,7R)-1,3,7-Octanetriol (1)
(3S,5R,6S,7E,9x)-7-Megastigmene-3,6,9-triol 9-glucoside (1)
(3S,7E,9R)-4,7-Megastigmadiene-3,9-diol 9-[apiosyl-(1->6)-glucoside] (1)
(3Z,6Z)-3,6-Nonadien-1-ol (1)
(3beta,22E)-26,27-Dinorergosta-5,22-dien-3-ol (1)
(4-{3-[2,4-dihydroxy-5-(3-methylbut-2-en-1-yl)phenyl]-2-hydroxy-3-oxopropyl... (1)
(5-{4-[2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-3,4-dihydro-2H-1-benzopyran... (1)
(7''R,8''R)-4,7''-Epoxy-3''-methoxy-4'',5,9,9''-lignanetetrol 9''-glucoside (1)
(8E,15E)-1,8,15-Heptadecatriene-11,13-diyne (1)
(9Z,11E,13E,15Z)-4-Oxo-9,11,13,15-octadecatetraenoic acid (1)
(Ac)2-L-Lys-D-Ala (1)
(Iso)Citrate (1)
(Iso)Leucine (1)
(R)-1,3-Octanediol (1)
(R)-2-Benzylsuccinate (1)
(R)-2-Hydroxysterculic acid (1)
(R)-3-Hydroxy-5-phenylpentanoic acid (1)
(R)-3-Hydroxy-Octadecanoic acid (1)
(R)-6''-O-(4-Geranyloxy-2-hydroxycinnamoyl)-marmin (1)
(R)-Marmin (1)
(R)-Shinanolone (1)

Study type

Transcription profiling by tiling array (3)
RNA-seq of total RNA (2)
RIP-seq (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of coding RNA (1)

Release Date

2025 (15)
2023 (7)
2022 (7)
2020 (6)
2014 (6)
2026 (5)
2012 (5)
2016 (5)
2024 (4)
2021 (4)
2015 (4)
2017 (3)
2018 (2)
2011 (2)
2019 (1)
2013 (1)
2008 (1)

Lab affiliation

Bioprocess Engeneering, IVT, Otto-von-Guericke University, Magdeburg, Germany (1)
Leibniz-Institut für Analytische Wissenschaften - ISAS - e.V. Otto-Hahn-Str. 6b D-44227 Dortmund Germany Tel.: +49 (0) 231-1392-4143 Fax: +49 (0) 231-1392-4850 (1)
Otto von Guericke University Magdeburg (1)

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Biogas Plant Survey Magdeburg 2014-2016

Biogas plants (BGPs) produce methane and carbon dioxide through the anaerobic digestion of agricultural waste. Identification of strategies for more stable biogas plant operation and increased biogas yields require better knowledge about the individual degradation steps and the interactions within t...

ORGANISM(S): environmental samples <Methanosarcinales>

2019-05-03 | PXD009349 | Pride

Laminar activity in the hippocampus and entorhinal cortex related to novelty and episodic encoding.

Not available

S-EPMC4263140 | biostudies-literature

Functional subregions of the human entorhinal cortex.

Not available

S-EPMC4458841 | biostudies-literature

AMPK activation induces RALDH+ tolerogenic dendritic cells by rewiring glucose and lipid metabolism.

Dendritic cell (DC) activation and function are underpinned by profound changes in cellular metabolism. Several studies indicate that the ability of DCs to promote tolerance is dependent on catabolic metabolism. Yet the contribution of AMP-activated kinase (AMPK), a central energy sensor promoting c...

2024-08-16 | MTBLS10647 | MetaboLights

Light-driven modulation of proximity-enhanced functionalities in hybrid nano-scale systems.

Not available

S-EPMC12332133 | biostudies-literature

Modulation of cardiomyocyte contractility and action potentials with chemogenetic chloride currents.

Not available

S-EPMC11908473 | biostudies-literature

Escape of Tick-Borne Flavivirus from 2'-C-Methylated Nucleoside Antivirals Is Mediated by a Single Conservative Mutation in NS5 That Has a Dramatic Effect on Viral Fitness.

Not available

S-EPMC5640847 | biostudies-literature

Coenzyme A fueling with pantethine limits autoreactive T cell pathogenicity in experimental neuroinflammation.

Not available