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ProteomicsPhosphorylation dynamics in a flg22-induced, G-protein dependent network reveals the RGS1 phosphatase
The Microbe Associated Molecular Pattern flg22 is recognized in a FLAGELLIN-SENSITVE 2-dependent manner in root tip cells. Here, we show a rapid and massive change in protein abundance and phosphorylation state of the Arabidopsis root cell proteome in wildtype and a mutant deficient in heterotrimer...
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2023-08-16 | MSV000092672 | MassIVE
ProteomicsA Global Analysis of Receptor Tyrosine Kinase – Protein Phosphatase Interactome
Receptor tyrosine kinases (RTKs) and protein phosphatases comprise protein families that play crucial roles in cell signaling. However, a comprehensive picture of how RTKs functionally associate with phosphatases remains elusive. We aimed to study this problem by using two protein-protein interactio...
ORGANISM(S): Homo sapiens (Human) 
2017-01-11 | PXD004248 | Pride
Tyrosine kinaase Phosphatase interactome 
TranscriptomicsA comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation
The inactive X chromosome (Xi) serves as a model to understand gene silencing on a global scale. Here, we perform identification of direct RNA interacting proteins? (iDRiP) to isolate a comprehensive protein interactome for Xist, an RNA required for Xi silencing. We discover multiple classes of inte...
ORGANISM(S): Mus musculus 
2015-06-19 | E-GEOD-67516 | biostudies-arrayexpress
ProteomicsInteractome of the influenza A virus transcription/replication machinery
Analyses of AP-MS experiments performed in HEK 293T cells infected with the influenza A/WSN/33 virus. In half of the experiments the virus was modified to contain a C-terminal Strep tag on the polymerase subunit PB2. Full details in York et al. 'Interactome analysis of the influenza A virus transcr...
ORGANISM(S): Influenza A Virus Homo Sapiens (ncbitaxon:9606) 
2014-06-16 | MSV000078741 | MassIVE
UnknownA Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome.
Not available
S-EPMC5663465 | biostudies-literature
UnknownRearrangement of the Protein Phosphatase 1 Interactome During Heart Failure Progression.
Not available
S-EPMC6193872 | biostudies-literature
UnknownProtein interactome of the Cancerous Inhibitor of protein phosphatase 2A (CIP2A) in Th17 cells.
Not available
S-EPMC8008788 | biostudies-literature
GenomicsX-chromosome dynamics revealed by the RNA interactome and chromosomal binding of CTCF
CTCF is a master regulator that plays a role in genome architecture and gene expression. A key aspect of CTCF’s mechanism involves bringing together distant genetic elements for intra- and inter-chromosomal interactions. Evidence from epigenetic processes, such as X-chromosome inactivation (XCI), su...
ORGANISM(S): Mus musculus 
2015-01-09 | E-GEOD-58242 | biostudies-arrayexpress
OtherAlterations in the interactome of serine/threonine protein phosphatase type-1 in atrial fibrillation patients.
Data from ProteomeXchange, PXD ID: PXD000697. Exiperiment: PP1_Mouse_raw_IgG, file: OR8_121211_NL_DC_PP1_Gel4_B_labelfree2.mzml. Published as part of J Am Coll Cardiol. 2015 Jan 20;65(2):163-73 . From the Abstract: {{i}} Cardiac lysates were coimmunoprecipitated with anti-PP1c antibody followed by ...
ORGANISM(S): Mus_musculus_viruses, Mouse 
GPM32320014437 | GPMDB
Resource Reanalysis 
ProteomicsAn affinity-directed phosphatase (AdPhosphatase) system for targeted protein dephosphorylation
Reversible protein phosphorylation, catalysed by protein kinases and phosphatases, is a fundamental process that controls protein function and intracellular signalling. Failure of phospho-control accounts for many human diseases. While a kinase phosphorylates multiple substrates, a substrate is o...
ORGANISM(S): Homo sapiens (Human) 
2023-02-01 | PXD039200 | Pride
Affinity-directed phosphatase  adphosphatase  targeted dephosphorylation  ppp1ca ppp2ca  nanobody  ulk1  fam83d 
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