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We analyzed the prefractionated sample of the anammox bacterium Kuenenia stuttgartiensis strain CSTR1 after separation by size exclusion chromatograph. The prefractionated sample was obtained by first ultracentrifuging the cell extract and taking the intermediate fraction (the liquid fraction that w...
ORGANISM(S): Candidatus Kuenenia stuttgartiensis 
2025-02-03 | PXD054938 | Pride
K562 cell lysates were prefractionated by protein reversed-phase chromatography (Prot-RP), SDS-PAGE, and high-pH peptide RP (Pept-RP) to compare their method characteristics. The starting material was prefractionated to 10 fractions for each method. Each prefractionation method was conducted in trip...
ORGANISM(S): Homo Sapiens (human) 
We established a spectral library for data-independent analysis of human plasma samples, using a pooled plasma sample from Danish adults. The samples were prepared for proteome analysis using an in-house developed protocol consuming one microliter of plasma per sample, and the tryptic digest and sub...
ORGANISM(S): Homo sapiens (Human) 
2018-04-20 | PXD008163 | Pride
To investigate the effect of glioblastoma secretome in activating tau pathology, Glioblastoma cell line secretome were prefractionated with gel filtration chromatography. Secretome analyzed by LC-MS/MS and identified targets using PSM count quantitation.
ORGANISM(S): Homo sapiens (Human) 
2018-07-16 | PXD007969 | Pride
Cell-based phenotypic screening of natural product mixtures can reveal new biological and pharmacological principles but has been largely abandoned, partly because such mixtures can be difficult to deconvolute and often contain toxins that confound “down” assays. We reasoned that these concerns coul...
ORGANISM(S): Homo sapiens 
2026-09-01 | GSE308354 | GEO
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