Proteolytic targets

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Unknown (661)
Proteomics (216)
Transcriptomics (107)
Genomics (45)
Metabolomics (6)
Other (5)

Organisms

Allexis (184)
Arabidopsis thaliana (184)
Entamoeba histolytica HM-1:IMSS-A (184)
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Homo sapiens (184)
Listeria monocytogenes (184)
Homo sapiens (64)
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synthetic construct (1)
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Organisms

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Repository

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Progressive supranuclear palsy (2)
Systemic lupus erythematosus (2)
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Glioblastoma (1)
Actinic keratosis (1)
Aortic valve insufficiency (1)
Bicuspid aortic valve disease (1)
Brain glioblastoma multiforme (1)
Colon mucinous adenocarcinoma (1)
Colorectal adenocarcinoma (1)

Technology Type

Mass Spectrometry (184)
Shotgun proteomics (112)
Affinity purification coupled with mass spectrometry proteomics (34)
Bottom-up proteomics (33)
Data-dependent acquisition (24)
Gel-based experiment (12)
Mass spectrometry (6)
SWATH MS (5)
Data-independent acquisition (4)
Top-down proteomics (4)
SRM/MRM (3)
Affinity proteomics (2)
HDMSE (2)
MSE (2)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Mass spectrometry imaging (1)
Metaproteomics (1)

Instrument Platform

Illumina HiSeq 2000 (7)
LTQ (4)
Orbitrap Exploris 480 (4)
LTQ Orbitrap Elite (3)
Q Exactive (3)
Illumina NovaSeq 6000 (2)
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Gas Chromatography MS - positive (2)
BD FACS Aria Cell Sorter (1)
454 GS FLX+ (1)
G2565AA DNA microarray scanner [Agilent] (1)
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Illumina Genome Analyzer II (1)
Illumina HiSeq 2500 (1)
Impact (1)
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Q-Exactive HF mass spectrometer (1)
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Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
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Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2026 (32)
2025 (31)
2023 (27)
2024 (25)
2021 (25)
2022 (22)
2010 (21)
2020 (20)
2017 (15)
2016 (15)
2015 (15)
2018 (15)
2014 (13)
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2013 (11)
2012 (11)
2011 (9)
2008 (7)
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2006 (4)
2007 (3)
2005 (3)
2004 (1)

UNIPROT ID/AC

6PGL_HELPY (1)
85962.C694_00040 (1)
85962.C694_00275 (1)
85962.C694_00510 (1)
85962.C694_00935 (1)
85962.C694_01080 (1)
85962.C694_01205 (1)
85962.C694_02750 (1)
85962.C694_03200 (1)
85962.C694_03205 (1)
85962.C694_03530 (1)
85962.C694_03705 (1)
85962.C694_03715 (1)
85962.C694_03730 (1)
85962.C694_04635 (1)
85962.C694_04640 (1)
85962.C694_05100 (1)
85962.C694_05145 (1)
85962.C694_05150 (1)
85962.C694_05210 (1)
85962.C694_05650 (1)
85962.C694_05655 (1)
85962.C694_05750 (1)
85962.C694_05755 (1)
85962.C694_06925 (1)
85962.C694_06985 (1)
85962.C694_07065 (1)
85962.C694_07285 (1)
85962.C694_07295 (1)
85962.C694_07300 (1)

CHEBI ID

CHEBI:131667 (1)
CHEBI:84506 (1)
CHEBI:131663 (1)
CHEBI:131662 (1)
CHEBI:131661 (1)
CHEBI:131660 (1)
CHEBI:131658 (1)
CHEBI:131655 (1)
CHEBI:131654 (1)
CHEBI:131694 (1)
CHEBI:131693 (1)
CHEBI:53454 (1)
CHEBI:79494 (1)
CHEBI:52450 (1)
CHEBI:131665 (1)
CHEBI:136075 (1)
CHEBI:75757 (1)
CHEBI:131688 (1)
CHEBI:131689 (1)
CHEBI:67061 (1)
CHEBI:79110 (1)
CHEBI:74671 (1)
CHEBI:131687 (1)
CHEBI:131668 (1)
CHEBI:90579 (1)
CHEBI:74971 (1)
CHEBI:45240 (1)
CHEBI:131659 (1)
CHEBI:131695 (1)
CHEBI:75455 (1)

Metabolite Name

Propionic acid (3)
Isovaleric acid (3)
Valeric acid (3)
Soyasaponin Ba (2)
Sambutoxin (2)
Thr-Pro (2)
Heptanoic acid (2)
Octanoic acid (2)
Naringenin (2)
1,5-Isoquinolinediol (2)
Saccharin (2)
Uracil (2)
Vigabatrin (2)
Cellobiose (2)
Thymine (2)
Citrulline (2)
Isobutyric acid (2)
Hexanoic acid (2)
Butyric acid (2)
Acetic acid (2)
4-Hydroxyphenylacetaldehyde (2)
Mupirocin (2)
Methylgingerol (2)
Nonanoic acid (2)
Decanoic acid (2)
4-Hydroxybenzaldehyde (2)
Leu-Ile (2)
Adenosine (2)
Gly-Val (2)
Adenine (2)

First Public Date

2023 (9)
2026 (4)
2022 (4)
2024 (3)
2020 (3)
2017 (3)
2025 (2)
2018 (2)
2014 (2)
2016 (1)

Classification

bacteria (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)
N6 (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (63)
RNA-seq of coding RNA (13)
ChIP-seq (7)
Other (3)
Proteomic profiling by array (2)
RNA-seq of non coding RNA (2)
Transcription profiling by SAGE (1)
Unknown experiment type (1)
RNAi profiling by array (1)
ChIP-chip by array (1)
RIP-seq (1)
Genotyping by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2023 (67)
2021 (66)
2022 (55)
2020 (48)
2025 (46)
2024 (44)
2019 (44)
2014 (43)
2011 (39)
2017 (38)
2016 (37)
2015 (35)
2018 (34)
2013 (31)
2012 (31)
2010 (30)
2009 (14)
2008 (12)
2006 (11)
2005 (9)
2026 (9)
2007 (8)
2001 (2)
2000 (2)
2004 (1)
2003 (1)
2002 (1)
1997 (1)

Lab affiliation

Centre for Proteome Research, University of Liverpool, Liverpool, UK (9)
Weizmann Institute of Science (6)
Department of Pediatrics, University of Groningen, University Medical Center Groningen (UMCG), 9713 AV Groningen, The Netherlands (3)
Cancer Biology Department, Fox Chase Cancer Center, Philadelphia, PA, USA (2)
Core Facility for Mass Spectrometry and Proteomics, Center for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance, 69120 Heidelberg, Germany (2)
Department of Chemistry, Imperial College London, Exhibition Road, London SW7 2AZ, UK (2)
Department of Internal Medicine, Section on Molecular Medicine, Wake Forest School of Medicine, Winston-Salem, NC, United States (2)
Department of Molecular Biosciences, University of South Florida, Tampa, FL, USA Center for Antimicrobial Resistance, University of South Florida, Tampa, FL, USA (2)
Department of Neurobiology, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA (2)
Department of Oncology-Pathology, Karolinska Institutet and Science for Life Laboratory, Stockholm, Sweden (2)
EPFL (2)
Institut für Experimentelle und Klinische Pharmakologie und Toxikologie, PZMS, Universität des Saarlandes, Geb. 46, 66421 Homburg, Germany (2)
LEO Foundation Center for Cutaneous Drug Delivery Department of Pharmacy University of Copenhagen Denmark (2)
Virginia Tech, Biological Sciences (2)
1: Evotec (München) GmbH, Am Klopferspitz 19a, 82151 Martinsried, Germany 2: Cell Signaling Group, Department of Molecular Biology, Max Planck Institute of Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany (1)
9McKusick-Nathans Institute of Genetic Medicine, 10Departments of Biological Chemistry, and 11Pathology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. (1)
Associate Professor Center for Systems Biology and Molecular Medicine Yenepoya Research Centre Yenepoya (Deemed to be University) (1)
Australian Regenerative Medicine Institute, Monash University, Wellington Road, Clayton, VIC 3800, Australia (1)
Baker Heart and Diabetes Institute, Aus (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University Munich (TUM) Gregor-Mendel-Strasse 4 85354 Freising GERMANY (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Biology department, Washington University in St Louis, St Louis, MO, USA (1)
Bioscience Institute,Faculty for Medical Sciences at Newcastle University. Newcastle-Upon-Tyne United Kingdom NE24HH (1)
Boston University (1)
Calico Life Sciences (1)
Cancer Research UK Scotland Institute (Formerly the Cancer Research UK Beatson Institute) Garscube Estate Switchback Road Bearsden Glasgow, G61 1BD (1)
Cancer Signaling and Microenvironment Program,Fox Chase Cancer Center, Philadelphia, PA, USA (1)
Center for Functional Protein Assemblies (CPA), Department of Chemistry, Chair of Organic Chemistry II, Technical University of Munich, 85748 Garching, Germany (1)
Center for Functional Protein Assemblies, Department of Bioscience, TUM School of Natural Sciences, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, 85748 Garching, Germany (1)
Center for Functional Protein Assemblies, Technical University of Germany, Germany (1)

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TAILS N-Terminomics and Proteomics Show Complex Regulation of Proteolytic Processing by O-glycosylation

Proteolytic processing is an irreversible post-translational modification functioning as a ubiquitous regulator of cellular activity. Protease activity is tightly regulated by control of gene expression, compartmentalisation of enzyme and substrate, zymogen activation, enzyme inactivation, and subst...

ORGANISM(S): Homo sapiens (Human)

2018-10-08 | PXD009453 | Pride

Tissue inhibitors of metalloproteinases are proteolytic targets of matrix metalloproteinase 9.

Not available

S-EPMC10843048 | biostudies-literature

N-Terminomic Changes in Neurons During Excitotoxicity Reveal Proteolytic Events Associated With Synaptic Dysfunctions and Potential Targets for Neuroprotection.

Not available

S-EPMC10199228 | biostudies-literature

The serine protease HTRA1 targets tau fibrils and provides a proteolytic barrier against pathogenic protein conformations.

Not available

S-EPMC12547462 | biostudies-literature

GLA and profiling of proteasome, Spt23 and Mga2

The proteasome can regulate transcription through proteolytic processing of transcription factors and via gene locus binding, but few targets of proteasomal regulation have been identified. Using genome-wide location analysis and transcriptional profiling in Saccharomyces cerevisiae, we have establ...

ORGANISM(S): Saccharomyces cerevisiae

2006-02-28 | E-GEOD-4272 | biostudies-arrayexpress

N-Degradomic Analysis Reveals a Proteolytic Network Processing the Podocyte Cytoskeleton.

Not available

S-EPMC5619959 | biostudies-literature

Mapping proteolytic neo-N termini at the surface of living cells.

Not available

S-EPMC7923363 | biostudies-literature

Proteolytic chemokine cleavage as a regulator of lymphocytic infiltration in solid tumors.

Not available

S-EPMC6890590 | biostudies-literature

Molecular characterization of proteolytic cleavage sites of the Pseudomonas syringae effector AvrRpt2.