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GenomicsPTex - Purification of Cross-linked RNA-Protein Complexes by Phenol-Toluol Extraction
PTex - Purification of Cross-linked RNA-Protein Complexes by Phenol-Toluol Extraction
PRJNA453536 | ENA
ProteomicsGlobal mapping of RNA-binding proteins in multi-drug resistant Staphylococcus aureus using PTex
Phenol Toluol extraction (PTex) carried out two steps organic-phase separation: first pH neutral phenol–Toluol extraction separated RNA and protein from DNA: RNA and proteins to the top aqueous phase but DNA and membranes in the interface. Aqueous phase then went through two rounds acid-phenol extra...
ORGANISM(S): Staphylococcus aureus 
2022-05-31 | PXD023414 | Pride
Uv cross-linking Rbdome Protein-rna interactions Organic phase purification Rna-binding proteins Rbpome Staphylococcus aureus 
ProteomicsPurification of Cross-linked RNA-Protein Complexes by Phenol-Toluol Extraction
Recent methodological advances allowed the identification of an increasing number of RNAbinding proteins (RBPs) and their RNA-binding sites. RNA interactome capture is, however, limited to proteins interacting with polyadenylated RNAs while RBPs associating with nonadenylate RNA classes cannot be pu...
ORGANISM(S): Homo sapiens (Human) Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 
2019-03-12 | PXD009571 | Pride
Human Lc-msms Shotgun Salmonella Rna-binding proteins Ptex 
UnknownPTEX helps efficiently traffic haemoglobinases to the food vacuole in Plasmodium falciparum.
Not available
S-EPMC10414648 | biostudies-literature
TranscriptomicsPTex - Purification of Cross-linked RNA-Protein Complexes by Phenol-Toluol Extraction
PTex is a protocol to purify UV-cross-linked ribonucleoproteins (RNPs) in an unbiased and sequence-independent fashion. Total RNA from HEK293 cells was analysed by RNASeq from whole cell lysates as well as after purification of RNPs.
ORGANISM(S): Homo sapiens 
2019-02-02 | GSE113655 | GEO
UnknownSequence elements within the PEXEL motif and its downstream region modulate PTEX-dependent protein export in Plasmodium falciparum.
Not available
S-EPMC10952997 | biostudies-literature
UnknownStable Translocation Intermediates Jam Global Protein Export in Plasmodium falciparum Parasites and Link the PTEX Component EXP2 with Translocation Activity.
Not available
S-EPMC4864081 | biostudies-literature
UnknownContrasting Inducible Knockdown of the Auxiliary PTEX Component PTEX88 in P. falciparum and P. berghei Unmasks a Role in Parasite Virulence.
Not available
S-EPMC4757573 | biostudies-literature
UnknownEXP2 is a nutrient-permeable channel in the vacuolar membrane of Plasmodium and is essential for protein export via PTEX.
Not available
S-EPMC6158082 | biostudies-literature
TranscriptomicsDifferential gene expression in DEVH1 knock-in Leishmania infantum promastigotes
The DEAD/H RNA helicase LINF_220021200 (DEVH1) gene from Leishmania infantum (Kinetoplastida:Trypanosomatidae) was cloned in the pTEX expression plasmid vector for trypanosomatids. Leishmania infantunm promastigotes were transfected and a knock-in L. infantum promastigote cell line was selected with...
ORGANISM(S): Leishmania infantum 
2022-08-03 | GSE202674 | GEO
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