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TranscriptomicsLactobacillus johnsonii NCC comparative genomics with L. iatae
Whole genome DNA microarray designed for the probiotic L. johnsonii strain NCC533 was used for comparative genomic hybridization (CGH) of L. johnsonii ATCC 33200T, L. johnsonii BL261, L. gasseri ATCC 33323T and L. iatae BL263 (CECT 7394T). In these experiments, the fluorescence ratio distributions o...
ORGANISM(S): Lactobacillus johnsonii 
2010-11-24 | E-GEOD-21627 | biostudies-arrayexpress
GenomicsComparative epigenomic analysis of JUN, H3K27ac, H3K4me3 and H3K4me2 in primary aortic endothelial cells
This accession ID containes ChIP-seq data for JUN, H3K27ac, H3K4me3 and H3K4me2 in primary aortic endothelial cells. This data will be used for: 1) A phylogenetic framework for comparative analysis of chromatin state in mammalian species. Sara Knaack, Lina Antounians, Azad Alizada, Alejandra Medina...
ORGANISM(S): Rattus norvegicus 
2025-06-19 | E-MTAB-14612 | biostudies-arrayexpress
TranscriptomicsCGH analysis of 39 Lactococcus lactis strains.
Pangenome arrays contain DNA oligomers targeting several sequenced reference genomes from the same species. In microbiology these can be employed to investigate the often high genetic variability within a species by comparative genome hybridization (CGH). The biological interpretation of pangenome C...
ORGANISM(S): Lactococcus lactis subsp. cremoris 
2010-06-24 | E-GEOD-12638 | biostudies-arrayexpress
TranscriptomicsResponse of Leptospirillum ferriphilum DSM14647 to elevated NaCl concentration
Leptospirillum ferriphilum is an important acidophilic ferrous iron-oxidizing species for bioleaching or biooxidation to win metals like copper or gold, respectively. L. ferriphilum is inhibited by elevated conentrations of chloride. In the present study, the type strain of L. ferriphilum (i.e. stra...
ORGANISM(S): Leptospirillum ferriphilum 
2022-03-31 | E-MTAB-11136 | biostudies-arrayexpress
UnknownDebt portfolios of street vendors: Survey data from Colombia.
Not available
S-EPMC6484363 | biostudies-literature
TranscriptomicsCGH profiles of primary breast carcinomas from HBOC (Hereditary Breast and Ovarian Cancer) families
89 tumors from women that were eligible for, and subjected to, routine diagnostic testing according to the HBOC criteria but were negative for pathogenic BRCA1/2-mutations or carried an UV in either BRCA1/2 A BRCA2-classifier was built using array-CGH profiles of 28 BRCA2-mutated and 28 sporadic bre...
ORGANISM(S): Homo sapiens 
2010-07-05 | E-GEOD-22481 | biostudies-arrayexpress
TranscriptomicsProbing the pan genome of a foodborne bacterial pathogen Listeria monocytogenes
Full title: Probing the pan genome of a foodborne bacterial pathogen Listeria monocytogenes: Implications for its niche adaptation, pathogenesis, and evolution Listeria monocytogenes is a foodborne bacterial pathogen well known for adaptability to diverse environmental and host niches, and a high f...
ORGANISM(S): Listeria monocytogenes EGD-e 
2010-04-06 | E-GEOD-20367 | biostudies-arrayexpress
TranscriptomicsAnalysis of the genome content of Lactococcus garvieae by genomic interspecies microarray hybridization
Background: Lactococcus garvieae is a bacterial pathogen that affects different animal species and human. Despite the widespread distribution and emerging clinical significance of L. garvieae in both veterinary and human medicine, there is almost a complete lack of knowledge about the genetic conte...
ORGANISM(S): Lactococcus garvieae 
2010-03-23 | E-GEOD-19005 | biostudies-arrayexpress
ProteomicsRasGRP1 is a Causal Factor in the Development of L-DOPA-induced dyskinesia in Parkinson Disease
The therapeutic benefits of L–3,4–dihydroxyphenylalanine (L-DOPA) in Parkinson’s disease (PD) patients severely diminishes with the onset of L-DOPA-induced dyskinesia (LID), a debilitating motor side effect. LID is mainly due to altered dopaminergic signaling in the striatum, a brain region that con...
ORGANISM(S): Mus musculus (Mouse) 
2020-05-22 | PXD017434 | Pride
Dyskinesia Parkinson disease Rasgrp1 
UnknownBaseline urinalysis values in common bottlenose dolphins under human care in the Caribbean.
Not available
S-EPMC6838721 | biostudies-literature
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