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TranscriptomicsComparative Transcript Abundance in E. Coli Degradosome Mutants and their Parental Strains
Comparative transcript abundance in E. Coli degradosome mutants and their parental strains. Abstract: RNase E, an essential endoribonuclease of Escherichia coli, interacts through its C-terminal region with multiple other proteins to form a complex termed the RNA degradosome. To investigate the degr...
ORGANISM(S): Escherichia coli 
2006-01-05 | E-GEOD-3977 | biostudies-arrayexpress
TranscriptomicsGlobal analysis of Escherichia coli RNA degradosome function
This SuperSeries is composed of the following subset Series: GSE3977: Comparative Transcript Abundance in E. Coli Degradosome Mutants and their Parental Strains GSE3978: mRNA Decay in E. Coli Degradosome Mutants and their Parental Strains Abstract: RNase E, an essential endoribonuclease of Escheric...
ORGANISM(S): Escherichia coli 
2006-03-07 | E-GEOD-4394 | biostudies-arrayexpress
TranscriptomicsmRNA Decay in E. Coli Degradosome Mutants and their Parental Strains
mRNA decay in E. Coli degradosome mutants and their parental strains following transcriptional arrest with rifampicin. Abstract: RNase E, an essential endoribonuclease of Escherichia coli, interacts through its C-terminal region with multiple other proteins to form a complex termed the RNA degradoso...
ORGANISM(S): Escherichia coli 
2006-01-05 | E-GEOD-3978 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of E. Coli degradosome mutants and their parental strains to analyse comparative transcript abundance
Comparative transcript abundance in E. Coli degradosome mutants and their parental strains.
ORGANISM(S): Escherichia coli 
2005-11-01 | E-SMDB-2680 | biostudies-arrayexpress
ProteomicsStructural elucidation of a novel mechanism for bacteriophage-based inhibition of the RNA degradosome
In all domains of life, the catalysed degradation of RNA facilitates rapid adaption to changing environmental conditions. We identified a virus-encoded protein that directly binds and inhibits the RNA degradation machinery of its bacterial host, allowing efficient accumulation of viral RNA in the in...
ORGANISM(S): Escherichia coli 
2016-07-27 | PXD003285 | Pride
Escherichia coli Protein-rna interactions Rna degradosome X-ray crystallography Φkz Protein-protein interactions Pseudomonas aeruginosa Phage 
TranscriptomicsTranscription profiling of mRNA decay in E. Coli degradosome mutants and their parental strains following transcriptional arrest with rifampicin
mRNA decay in E. Coli degradosome mutants and their parental strains following transcriptional arrest with rifampicin.
ORGANISM(S): Escherichia coli 
2005-11-01 | E-SMDB-2681 | biostudies-arrayexpress
ProteomicsRNA degradosome components purified from Mycobacterium tuberculosis
The dataset accompanying a publication describing the RNA degradosome components in Mycobacterium tuberculosis (Mtb). Individual RNA degradosome components from Mtb (PNPase, RNase E, RNase J, RhlE and Enolase) were tagged with eGFP and used as baits to pull-down their interaction partners. The prote...
ORGANISM(S): Mycobacterium tuberculosis H37Rv 
2019-04-01 | PXD012662 | Pride
Tuberculosis Rna degradation 
ProteomicsIdentification of proteins associated with the human mitochondrial degradosome
The human mitochondrial degradosome is a complex of the ribonuclease PNPase (Q8TCS8, encoded by PNPT1 gene) and RNA helicase SUV3 (Q8IYB8, encoded by SUPV3L1 gene). The aim of the project was to identify proteins which co-purify with both subunits of the degradosome. To this end we used human 293 ce...
ORGANISM(S): Homo sapiens (Human) 
2018-07-06 | PXD009826 | Pride
Mitochondrial rna Supv3l1 Suv3 Pnpt1 Mitochondrial degradosome Pnpase 
ProteomicsRNA-bound proteome of Mycobacterium bovis
The dataset accompanying a publication describing the RNA degradosome components in Mycobacterium tuberculosis (Mtb). The RNA-bound proteome was determined by affinity purification of protein-RNA complexes from Mycobacterium bovis cells fed with 4-thiouridine and crosslinked via photoactivation at 3...
ORGANISM(S): Mycobacterium bovis 
2019-04-01 | PXD012661 | Pride
Tuberculosis Rna degradosome Rna bound proteome 
UnknownThe regulatory protein RraA modulates RNA-binding and helicase activities of the E. coli RNA degradosome.
Not available
S-EPMC2822920 | biostudies-literature
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