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GenomicsRNA pulldown target circGLS2
RNA pulldown target circGLS2
PRJNA786500 | ENA
ProteomicstRF-24 RNA pulldown in KYSE150 and KYSE30
To delineate the oncogenic mechanism of tRF-24 in ESCC, we performed RNA pull-down assays with biotinylated tRF-24 and antisense control, followed by mass spectrometry (MS) analysis.
ORGANISM(S): Homo sapiens (Human) 
2025-12-01 | PXD063163 | Pride
Human Kyse30 Esophagus Rna-pulldown Kyse150 
ProteomicsE12.5 diencephalon tissues LC-MS of wild-type mice after RNA pulldown with Crnde sense and anti-sense mRNA probes.
In order to explore the lncRNA Crnde interacting proteins in mouse diencephalon tissues, we first designed and synthesized Crnde sense and anti-sense mRNA probes, and collected the diencephalon tissues of embryonic mice for RNA pulldown experiment, and identified the enriched products by mass spectr...
ORGANISM(S): Mus musculus (Mouse) 
2026-02-14 | PXD056797 | Pride
Diencephalon lc-ms rna pulldown crnde 
ProteomicsRNA-bait dependent pulldown in Clostridium difficile
RNA-bait dependent pulldown of RBPs in Clostridium difficile
ORGANISM(S): Peptoclostridium difficile (strain 630) (Clostridium difficile) 
2021-05-17 | PXD022544 | Pride
Pulldown Coip Clostridium difficile Rna 
ProteomicsRNA pulldown-MS, Dlg4 RNA in mouse brain
Goal was to identify RNA-binding proteins with a preference for m6A-modified RNA using an RNA bait generated from a known m6A site in the Dlg4 (PSD-95) mRNA 3`-UTR. By comparison of differential enrichment between m6A-RNA pulldown fractions and A-RNA or no RNA fractions, we can identify m6A-binding ...
ORGANISM(S): Mus musculus (Mouse) 
2022-10-13 | PXD034159 | Pride
Pulldown M6a Rna Lc-ms/ms 
ProteomicsRNA pulldown-MS, Dlg4 RNA in mHippoE-2 cells
Goal was to identify RNA-binding proteins with a preference for m6A-modified RNA using an RNA bait generated from a known m6A site in the Dlg4 (PSD-95) mRNA 3`-UTR. By comparison of differential enrichment between m6A-RNA pulldown fractions and A-RNA or no RNA fractions, we can identify m6A-binding ...
ORGANISM(S): Mus musculus (Mouse) 
2022-10-13 | PXD034161 | Pride
Pulldown M6a Rna Lc-ms/ms 
ProteomicsIdentification of proteins specifically binding to ac4C RNA probes
As a newly identified mRNA modification, the regulation of ac4C remains largely unexplored. RNA-binding proteins (RBPs) that specifically binds to ac4C modification and mediate downstream cellular activities (readers) have not been reported yet. We synthesized acetylated and non-acetylated RNA probe...
ORGANISM(S): Homo sapiens (Human) 
2021-07-20 | PXD027014 | Pride
Rna pulldown Ac4c Acetylated rna probes 
GenomicsIdentification of nHOTAIRM1 RNA interactome through nHOTAIRM1 Native RNA Pulldown in WT iPSC-derived spinal motor neurons
Identification of nHOTAIRM1 RNA interactome through nHOTAIRM1 Native RNA Pulldown in WT iPSC-derived spinal motor neurons
PRJNA1421173 | ENA
GenomicsIdentification of lncMB3 RNA interactome through lncMB3 Native RNA Pulldown in MYC-amplified D283 Med cells.
Identification of lncMB3 RNA interactome through lncMB3 Native RNA Pulldown in MYC-amplified D283 Med cells.
PRJNA1168168 | ENA
ProteomicsPulldown of RNA binding protein using SARS CoV 2 NSP1 RNA
RNA sensing is critical for RLR activation and downstream signaling. To identify molecules that are involved in modulating viral RNA recognition, we utilized biotin-labeled 60 nt single-stranded RNA (ssRNA) from SARS-CoV-2 NSP1 coding region (NSP1 ssRNA) to pull down proteins from RAW264.7 cells. Th...
ORGANISM(S): Mus musculus (Mouse) 
2026-04-08 | PXD064808 | Pride
Pulldown  rna binding protein  nsp1 rna  sars-cov-2 
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