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ProteomicsRumen metaproteome - A Structural and Functional Elucidation of the Rumen Microbiome Influenced by Various Diets and Microenvironments
The structure and function of the microbiome inhabiting the rumen are, amongst other factors, mainly shaped by the animal’s feed intake. Describing the influence of different diets on the inherent community arrangement and associated metabolic activities of the most active ruminal fractions (bacteri...
ORGANISM(S): Bacteria Archaea 
2017-08-15 | PXD006070 | Pride
Rumen Metaproteomics Lc-ms/ms 
ProteomicsMetabolic influence of core ciliates within the rumen microbiome
Protozoa comprise a major fraction of the microbial biomass in the rumen microbiome, of which the entodiniomorphs (order: Entodiniomorphida) and holotrichs (order: Vestibuliferida) are consistently observed to be dominant across a diverse genetic and geographical range of ruminant hosts. Despite...
ORGANISM(S): Capra hircus (Goat) 
2023-04-19 | PXD040454 | Pride
Metaproteomics Microbiome Metagenomics Rumen Protozoa 
ProteomicsMetabolic influence of core ciliates within the rumen microbiome
Protozoa comprise a major fraction of the microbial biomass in the rumen microbiome, of which the entodiniomorphs (order: Entodiniomorphida) and holotrichs (order: Vestibuliferida) are consistently observed to be dominant across a diverse genetic and geographical range of ruminant hosts. Despite ...
ORGANISM(S): Bos taurus (Bovine) 
2023-04-19 | PXD040467 | Pride
Metaproteomics Microbiome Metagenomics Rumen Protozoa 
ProteomicsProteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber
The rumen harbors a complex mixture of archaea, bacteria, protozoa and fungi that efficiently breakdown plant biomass and its complex dietary carbohydrates into soluble sugars that can be fermented and subsequently converted into metabolites and nutrients utilized by the host animal. While rumen bac...
ORGANISM(S): prokaryotic environmental samples Neocallimastigomycetes 
2020-10-14 | PXD017007 | Pride
Lc-msms Anerobic rumen fungi Rumen microbiome Metaproteome 
ProteomicsMetaproteome plasticity sheds light on the ecology of the rumen microbiome and its connection to host traits
The arsenal of genes that microbes express reflect the way in which they sense their environment. We have previously reported that the rumen microbiome composition and its coding capacity are different in animals having distinct feed efficiency states, even when fed an identical diet. Here, we revea...
ORGANISM(S): Bos taurus (Bovine) 
2022-08-25 | PXD033418 | Pride
Feed efficient animal Rumen metaproteome Rumen microbiome Lc-ms/ms 
ProteomicsExposure of a bovine rumen microbiome model to glyphosate
We evaluated the effects of pure glyphosate and the formulations Durano TF and Roundup® LB plus in different concentrations on rumen microbiota bioreactor model using the Rumen Simulation Technique (RUSITEC). Application of the compounds in three concentrations (0.1 mg/L, 1.0 mg/L or 10 mg/L, n = 4 ...
ORGANISM(S): Bos taurus (Bovine) 
2022-05-08 | PXD032166 | Pride
Bioreactor Intestinal microbiome Glyphosate Bovine rumen model 
UnknownCharacterization of variations within the rumen metaproteome of Holstein dairy cattle relative to morning feed offering.
Not available
S-EPMC7035244 | biostudies-literature
ProteomicsMetaproteomic analysis of an enriched anaerobic rumen consortium (ERAC)
Metaproteomic analysis of an enriched anaerobic rumen consortium (ERAC) using sugarcane bagasse and rumen as unique carbon and microbial sources
ORGANISM(S): metagenomes 
2020-07-15 | PXD019219 | Pride
Metaproteome Anaerobic consortium 
ProteomicsThe metabolic influence of the core ciliate Entodinium caudatum within the rumen microbiome
Protozoa comprise a major fraction of the microbial biomass in the rumen microbiome, of which the genera Entodinium has been consistently observed to be dominant across a diverse genetic and geographical range of ruminant hosts. Despite the apparent core role that species such as Entodinium caudatum...
ORGANISM(S): Capra hircus 
2025-11-13 | PXD034779 | Pride
Metaproteomics Multi-omics Protozoa 
ProteomicsThe metabolic influence of the core ciliate Entodinium caudatum within the rumen microbiome
Protozoa comprise a major fraction of the microbial biomass in the rumen microbiome, of which the genera Entodinium has been consistently observed to be dominant across a diverse genetic and geographical range of ruminant hosts. Despite the apparent core role that species such as Entodinium caudatum...
ORGANISM(S): Bos taurus (Bovine) 
2025-11-13 | PXD034544 | Pride
Metaproteomics Multi-omics Protozoa 
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