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ProteomicsS. elongatus PCC 7942 Limited Proteolysis Structural Proteomics (JM-PB-DP3), LiP-MS-Pro
The purpose of this experiment was to investigate structural alterations in proteins involved in central carbon metabolism and photosynthetic electron transfer pathways in Synechococcus elongatus PCC 7942. Sample data was obtained from S. elongatus PCC 7942 cell lysates treated with pronase (1:200 e...
ORGANISM(S): Synechococcus Elongatus Pcc 7942 (ncbitaxon:1140) 
2025-07-29 | MSV000098676 | MassIVE
ProteomicsS. elongatus PCC 7942 Limited Proteolysis Structural Proteomics (JM-PB-DP3), LiP-MS-Optim
The purpose of this experiment was to investigate structural alterations in proteins involved in central carbon metabolism and photosynthetic electron transfer pathways in Synechococcus elongatus PCC 7942. Sample data was obtained from S. elongatus PCC 7942 cell lysates treated with different non-sp...
ORGANISM(S): Synechococcus Elongatus Pcc 7942 (ncbitaxon:1140) 
2025-07-29 | MSV000098675 | MassIVE
ProteomicsS. elongatus PCC 7942 Limited Proteolysis Structural Proteomics (JM-PB-DP3), TPP-MS-TMT10
The purpose of this experiment was to investigate structural alterations in proteins involved in central carbon metabolism and photosynthetic electron transfer pathways in Synechococcus elongatus PCC 7942. Sample data was obtained from S. elongatus PCC 7942 cell lysates treated across 10 temperature...
ORGANISM(S): Synechococcus Elongatus Pcc 7942 (ncbitaxon:1140) 
2025-07-29 | MSV000098679 | MassIVE
ProteomicsS. elongatus PCC 7942 Circadian Thermo Proteo Profiling (TPP) Proteomics - Light vs Dark
Microfractionated TMT10-labeled samples from TPP experimental assays investigating structural alterations in Light vs Dark growth conditions. Samples are Synechococcus elongatus PCC 7942 cell lysates (BTO:0004304). Purpose: To evaluate structural proteome responses under light and dark conditions. T...
ORGANISM(S): Synechococcus Elongatus Pcc 7942 (ncbitaxon:1140) 
2025-11-14 | MSV000099906 | MassIVE
ProteomicsS. elongatus PCC 7942 Proteome Integral Solubility Alteration (PISA) Proteomics - Light vs Dark with Dense and Dilute
PISA experimental assays investigating structural alterations in Light vs Dark growth conditions with Dense and Dilute conditions. Samples are representative of Synechococcus elongatus PCC 7942 cell lysates (BTO:0004304). Purpose: Detecting structural and abundance changes in cyanobacterial cultures...
ORGANISM(S): Synechococcus Elongatus Pcc 7942 (ncbitaxon:1140) 
2025-11-14 | MSV000099914 | MassIVE
ProteomicsS. elongatus PCC 7942 Circadian Thermo Proteo Profiling (TPP) Proteomics - Light vs Dark with Dense and Dilute
TMT10-labeled samples from TPP experimental assays investigating structural alterations in Light vs Dark growth conditions with Dense and Dilute cultures. Samples are Synechococcus elongatus PCC 7942 cell lysates (BTO:0004304). Purpose: Detecting structural remodeling across cyanobacterial proteome ...
ORGANISM(S): Synechococcus Elongatus Pcc 7942 (ncbitaxon:1140) 
2025-11-14 | MSV000099912 | MassIVE
ProteomicsS. elongatus PCC 7942 Limited Proteolysis (LiP) Proteomics - Light vs Dark with Reduced/Non-reduced preparations in Dense Cultures
LiP experimental assays investigating structural alterations in Dense Light vs Dense Dark growth conditions with Reduced/Non-reduced preparations. Samples are Synechococcus elongatus PCC7942 cell lysates (BTO:0004304). Purpose: Probing light- and dark-induced conformational changes in dense cyanobac...
ORGANISM(S): Synechococcus Elongatus Pcc 7942 (ncbitaxon:1140) 
2025-11-14 | MSV000099913 | MassIVE
ProteomicsHuman coronavirus-229E infection alters the structure of host RNA processing complexes
The purpose of this experiment was to evaluate the human host cellular response to wild-type human coronavirus strain 229E (HCoV-229E)(ncbitaxon:11137) infection. Sample data was obtained for mock and infected (MOI 3) immortalized human lung epithelial cells (A549), immortalized human lung fibroblas...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2024-11-05 | MSV000096303 | MassIVE
ProteomicsHuman coronavirus-229E infection alters the structure of host RNA processing complexes
The purpose of this experiment was to evaluate the human host cellular response to wild-type human coronavirus strain 229E (HCoV-229E)(ncbitaxon:11137) infection. Sample data was obtained for mock and infected (MOI 3) immortalized human lung epithelial cells (A549), immortalized human lung fibroblas...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2024-10-31 | MSV000096268 | MassIVE
ProteomicsApolipoprotein A-II Increases Cholesterol Efflux Capacity of Mature High-Density Lipoproteins Via the Apolipoprotein A-I C-terminus
Samples were processed using Global and Limited Proteolysis (LiP). Peptides and proteins were identified using MaxQuant (v1.6.17.0), then summarized using R package RomicsProcessor.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2024-07-29 | MSV000095479 | MassIVE
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