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TranscriptomicsRNA-Seq data of terminal differentiated cells in Dictyostelium discoideum
The intent of the experiment was to gather transcriptomic data from terminally differentiated cell types --spore, stalk, and cup cells-- in a simple multicellular model system, Dictyostelium discoideum, in order to characterize the cell-type specific gene expression patterns. Specifically, we dissoc...
ORGANISM(S): Dictyostelium discoideum 
2019-01-31 | E-MTAB-7215 | biostudies-arrayexpress
ModelsZakhartsev2022 - Constraint-based model of metabolism of Atlantic salmon (Salmo salar)
SALARECON links the Atlantic salmon genome to metabolic fluxes and growth, focusing on energy, amino acid, and nucleotide metabolism.
2023-01-11 | MODEL2207070001 | BioModels
TranscriptomicsGene expression profiling to recognize specific features of non-genotoxic carcinogens
The current test strategy for carcinogenicity is generally based on in vitro and in vivo genotoxicity assays. Non-genotoxic carcinogens (NGTXC) are negative for genotoxicity and go undetected. Therefore, alternative tests to detect these chemicals are urgently needed. NGTXC act through different mod...
ORGANISM(S): Mus musculus 
2014-10-23 | E-GEOD-44088 | biostudies-arrayexpress
UnknownAtomic Force Microscopy micro-rheology reveals large structural inhomogeneities in single cell-nuclei.
Not available
S-EPMC5556037 | biostudies-literature
UnknownDevelopment of a steady-state FRET-based assay to identify inhibitors of the Keap1-Nrf2 protein-protein interaction.
Not available
S-EPMC3843635 | biostudies-literature
ProteomicsA. niger LC-MS/MS different carbon sources
The A. niger strain N400 was cultured with different carbon sources.
ORGANISM(S): Aspergillus niger 
2016-11-28 | PXD004909 | Pride
Rhamnose Sorbitol Shotgun proteomics Aspergillus niger Mannose Glucose Arabinose Xylose Lc-ms/ms 
GenomicsIdentification of target genes of Cud-type transcription factor, spaA, in a Dictyostelid social amoebae by ChIP-seq
spaA is a Cud-type transcription factor that is essential for spore cell differentiation of Dictyostelium discoideum, a social amoeba. ChIP-seq was performed to identify spaA target genes.
ORGANISM(S): Dictyostelium discoideum 
2018-05-31 | E-MTAB-6000 | biostudies-arrayexpress
UnknownSpectroscopic Characterization of the 3+ and 2+ Oxidation States of Europium in a Macrocyclic Tetraglycinate Complex.
Not available
S-EPMC5067177 | biostudies-literature
TranscriptomicsDissecting modes of action of non-genotoxic carcinogens in primary mouse hepatocytes.
Under REACH, the European Community Regulation on chemicals, the testing strategy for carcinogenicity is generally based on in vitro and in vivo genotoxicity assays. Given that non-genotoxic carcinogens are negative for genotoxicity, this class of carcinogens will not be detected. Therefore, alterna...
ORGANISM(S): Mus musculus 
2012-06-25 | E-GEOD-35058 | biostudies-arrayexpress
UnknownModel-Based Characterization of the Pharmacokinetics of Pembrolizumab: A Humanized Anti-PD-1 Monoclonal Antibody in Advanced Solid Tumors.
Not available
S-EPMC5270291 | biostudies-literature
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