Shin M S MS - OmicsDI

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CHEBI ID

CHEBI:30769 (4)
CHEBI:32816 (4)
CHEBI:15741 (3)
CHEBI:15756 (3)
CHEBI:16865 (3)
CHEBI:17368 (3)
CHEBI:17568 (3)
CHEBI:17596 (3)
CHEBI:17992 (3)
CHEBI:18183 (3)
CHEBI:33508 (3)
CHEBI:6650 (3)
CHEBI:15318 (2)
CHEBI:15428 (2)
CHEBI:15603 (2)
CHEBI:15725 (2)
CHEBI:15940 (2)
CHEBI:15971 (2)
CHEBI:15978 (2)
CHEBI:16015 (2)
CHEBI:16027 (2)
CHEBI:16108 (2)
CHEBI:16199 (2)
CHEBI:16235 (2)
CHEBI:16414 (2)
CHEBI:16467 (2)
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CHEBI:16695 (2)
CHEBI:16708 (2)
CHEBI:16709 (2)

Metabolite Name

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Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

ChIP-seq (22)
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Other (1)
RNA-seq of coding RNA (1)

Release Date

2021 (64)
2020 (59)
2022 (58)
2018 (53)
2023 (50)
2024 (43)
2019 (35)
2025 (33)
2011 (30)
2016 (21)
2015 (20)
2014 (16)
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Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (13)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (4)
Cancer Research Center of Toulouse, INSERM UMR 1037, 31037 Toulouse, France Université Toulouse III Paul Sabatier, 31330 Toulouse, France (2)
Center for Theragnosis, Korea Institute of Science and Technology, Seoul, Korea (2)
EPFL (2)
Amgen Inc. (1)
Asan Medical Center, Clinical Proteomics Core, Republic of Korea (1)
Assistant professor, School of Biological Sciences, Seoul National University. (1)
Associate Professor Stephen F. and Fay Evans Martin Endowed Professorship in Chemistry CPRIT Scholar Department of Chemistry University of Texas at Austin (1)
BOKU University, Vienna, Austria (1)
Basic Research Lab for “Epigenetic Regeneration of Aged Skeleto-Muscular System (ERASMUS)”, Department of Molecular Genetics and Dental Pharmacology, School of Dentistry, Dental Research Institute, Seoul National University, Seoul, South Korea (1)
Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (1)
Center for Natural Product Systems Biology, Korea Institute of Science and Technology (1)
Center for Plant Aging Research, Institute for Basic Science, and Department of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu 42988, Republic of Korea (1)
Center for RNA Research, Institute for Basic Science, Seoul 08826, Korea School of Biological Sciences, Seoul National University, Seoul 08826, Korea (1)
Center for RNA Research, Institute for Basic Science, Seoul National University (1)
Center for theragnosis, Korea Institute of Science and Technology (1)
Chief, Epithelial Signaling and Transport Section NIH, NIDCR, Building 10, Room 1N-112, Bethesda MD 20892. U.S.A. (1)
DIRECTOR, THE PICOWER INSTITUTE FOR LEARNING AND MEMORYAT MIT PICOWER PROFESSOR OF NEUROSCIENCE, DEPARTMENT OF BRAIN AND COGNITIVE SCIENCES SENIOR ASSOCIATE MEMBER, BROAD INSTITUTE (1)
Dana Farber Cancer Institute (1)
Dana Farber Cancer Institute, Boston, MA Harvard Medical School, Boston, MA (1)
Department of Biochemistry, College of Life Science and Technology, Institute for Bio-medical Convergence Science and Technology, Yonsei University, Seoul, Republic of Korea (1)
Department of Biomedical Science and Technology, Kyung Hee Medical Science Research Institute, Kyung Hee University, Seoul, South Korea (1)
Department of Cancer Biology, Dana-Farber Cancer Institute Department of Cell Biology, Harvard Medical School (1)
Department of Laboratory Medicine, UCSF (1)
Department of Life Sciences and Division of Integrative Biosciences and Biotechnology Pohang University of Science and Technology Pohang 790-784, Republic of Korea (1)
Department of Life Sciences, POSTECH, Pohang, Republic of Korea (1)
Department of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Republic of Korea (South Korea) (1)
Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY, USA (1)
Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, Los Angeles, CA, USA Institute for Quantitative and Computational Biosciences, University of California, Los Angeles, Los Angeles, CA, USA (1)

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Untargeted lipid profiling following mTOR inhibition

The mechanistic target of rapamycin (mTOR) is pivotal in programming cellular lipid homeostasis for the structural and functional integrity of cells. Dysregulation of mTOR and consequent altered lipid metabolism are common features in various diseases, including cancers, making mTOR signaling a p...

2025-09-20 | MTBLS12837 | MetaboLights

HRMS1 DIA and DDA of Lyso-IP inputs from mouse gut epithelium and stem cells

These mouse gut lysates contained three sets, with Set A including 21 DDA experiments and 21 DIA experiments, Set C including 24 DDA and 24 DIA experiments, and Set G including 27 DDA RAWs and 26 DIA RAWs (one of the Set G DDA experiments was run twice). Experiment Set A was intended to compare lys...

ORGANISM(S): Mus Musculus (ncbitaxon:10090)

2024-07-26 | MSV000095444 | MassIVE

Expression data from brain, liver and spleen of Npc1-/- mice

Niemann-Pick Type C (NPC) disease is a rare, genetic, lysosomal disorder with progressive neurodegeneration. Poor understanding of the pathophysiology and lack of blood-based diagnostic markers are major hurdles in the treatment and management of NPC and several additional neurological, lysosomal di...

ORGANISM(S): Mus musculus

2012-12-27 | E-GEOD-39621 | biostudies-arrayexpress

Reanalysis of Data-dependent acquisition based proteomic datasets of Mycobacterium abscessus

Detection of species-specific proteotypic peptides for accurate and easy characterization of infectious non-tuberculous mycobacteria such as Mycobacterium abscessus is essential. Therefore, we carried out reanalysis of publicly available M. abscessus proteomic dataset MSV000085363, PXD015680 and PXD...

ORGANISM(S): Mycobacterium abscessus (strain ATCC 19977 / DSM 44196 / CIP 104536 / JCM 13569 / NCTC 13031 / TMC 1543)

2024-03-07 | PXD045930 | Pride

Transcriptional profiles of psychostimulant reinforcement in rats

Drug-induced alterations in transcriptional regulation play a central role in establishing the persistent neuroplasticities that occur during drug addiction. Additionally, changes in gene expression associated with drug administration provide valuable insight into the molecular basis of drug abuse. ...

ORGANISM(S): Rattus norvegicus

2013-06-27 | E-GEOD-43748 | biostudies-arrayexpress

Euglenophycin is produced in at least six species of euglenoid algae and six of seven strains of Euglena sanguinea.

Not available

S-EPMC5380236 | biostudies-literature

Enrichment and quantitation of newly secreted proteins under serum condition by combining BONCAT and pulsed SILAC

Despite the increasing interest of secretome involved in paracrine/autocrine mechanisms, the majority of the mass spectrometric cell secretome studies have been performed using serum-free medium (SFM), due to low-abundance of secreted proteins and high-abundance of contaminating fetal bovine serum (...

ORGANISM(S): Homo sapiens (Human)

2019-03-13 | PXD007529 | Pride

Boncat Serum Fbs Secretome Pulsed silac Lc-ms/ms

Unveiling molecular changes in guabiju during Aspergillus brasiliensis cultivation: insights from untargeted metabolomics

Black aspergilli exhibit remarkable bioconversion potential by transforming plant matrices into bioactive compounds, although their metabolic processes remain underexplored. This study investigated the biotransformation of metabolites during the solid-state cultivation of guabiju (Myrcianthes...

2025-08-08 | MTBLS12436 | MetaboLights

Transcription profiling of mouse frontal cortex after treatment with zntipsychotic drugs

Antipsychotic drugs are classified as typical and atypical based on extrapyramidal effects. However, since the frontal cortex is one of the most important regions for antipsychotic actions, this study attempted to classify antipsychotic drugs based on gene expression in the frontal cortex. Chlorprom...