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A test CellML 1.1 model which has a couple of sine approximations. This workspace and the data in it is primarily used for testing various things out.
We report genome-wide binding of the highly conserved TF Sine oculis (So), which is necessary for Drosophila eye development and has few previously known direct transcriptional targets. Our data identify novel putative targets of So-mediated regulation, including genes involved in multiple aspects o...
ORGANISM(S): Drosophila melanogaster 
Short interspersed element (SINE) RNAs are upregulated by cellular stresses1 (heat shock, DNA damage and viral infection) and accumulate in human diseases (macular degeneration2, lupus3, and Alzheimer’s disease4). These transcripts activate inflammasomes5, a family of cytoplasmic multiprotein comple...
ORGANISM(S): Homo sapiens (Human) 
2022-06-09 | PXD016019 | Pride
To identify the eye-enriched genes by comparing the mRNA expression profiles from wild type fly heads (CantonS) and eye-less fly heads (sine occulis).
ORGANISM(S): Drosophila melanogaster 
Targeting GI-SINE (Growth inducing B2-SINE) RNA in DRG neurons by Antisense Oligonucleotides (ASO)
B2-SINEs are noncoding RNAs which are transcribed by RNA polymerase III (Pol III) from short interspersed nuclear elements (SINEs), which are high copy number transposable elements in the mouse genome. Unexpectedly have observed significant induction of non-coding RNAs from the B2-SINE subclass of r...
ORGANISM(S): Mus musculus (Mouse) 
2025-09-29 | PXD041633 | Pride
RNA-seq analysis about Lx8-SINE B2 knocked down samples
B2-SINEs are noncoding RNAs which are transcribed by RNA polymerase III (Pol III) from short interspersed nuclear elements (SINEs), which are high copy number transposable elements in the mouse genome. Unexpectedly have observed significant induction of non-coding RNAs from the B2-SINE subclass of r...
ORGANISM(S): Mus musculus (Mouse) 
2025-05-05 | PXD060976 | Pride
In-cell RNA secondary structure analysis of functional SINE transcripts
GI-SINE Analyses
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