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Transcriptome-wide Organization of Subcellular Microenvironments Revealed by ATLAS-Seq

PRJNA590270 | ENA

Subcellular organization of single-cell C4 photosynthesis in Bienertia sinuspersici determined by large scale proteomics

Bienertia sinuspersici performs C4 photosynthesis without Kranz anatomy through subcellular compartmentalization of carbon fixation within individual cells. In this species, central compartment chloroplasts (C) and peripheral chloroplasts (P) collaborate with cytosolic and mitochondrial components i...

ORGANISM(S): Bienertia sinuspersici Arabidopsis thaliana (Mouse-ear cress)

2015-03-17 | PXD001910 | Pride

Transcriptome-wide Organization of Subcellular Microenvironments Revealed by ATLAS-Seq

Subcellular organization of RNAs and proteins is critical for cell function, but we still lack global maps and conceptual frameworks for how these molecules are localized in cells and tissues. Here we introduce ATLAS-Seq, which generates transcriptomes and proteomes from detergent-free tissue lysate...

ORGANISM(S): Mus musculus

2020-04-22 | GSE140630 | GEO

QUANTITATIVE SUBCELLULAR PROTEOMICS OF THE ORBITOFRONTAL CORTEX OF SCHIZOPHRENIA PATIENTS

We analyzed OFC post-mortem brain tissue from patients classified as residual schizophrenia according to the DMS-IV manual. In this classification, the patients do not manifest prominent positive psychotic symptoms but prevail characteristic disturbance of negative symptoms. Through the comparison o...

ORGANISM(S): Homo sapiens (Human)

2019-10-07 | PXD014350 | Pride

Cellular fractions Proteomics Schizophrenia Quantification

Transcriptome-wide organization of subcellular microenvironments revealed by ATLAS-Seq.

Not available

S-EPMC7293051 | biostudies-literature

Subcellular organization of UBE3A in human cerebral cortex.

Not available

S-EPMC6194692 | biostudies-literature

C1QBP mitochondrial interactome

The study of protein-protein interactions is an essential process to understand the biological functions of proteins and the underlying mechanisms. Co-immunoprecipitation coupled with mass spectrometry (CoIP-MS) is one of the most extensively used high-throughput techniques to discover novel protein...

ORGANISM(S): Homo Sapiens

2015-11-04 | MSV000079369 | MassIVE

The subcellular organization of neocortical excitatory connections.

Not available

S-EPMC2745650 | biostudies-literature

Multi-modal contrastive learning of subcellular organization using DICE.

Not available

S-EPMC11520230 | biostudies-literature

Youn_et_al_RNAbodies_SAINT3108

Youn et al. High-density proximity mapping reveals the subcellular organization of mRNA-associated granules and bodies (SAINTexpress 3108)

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2017-08-07 | MSV000081419 | MassIVE

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