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MetabolomicsTRF Microbiome Study NA/FA/FT/CDKO 4-14
Not available
ORGANISM(S): Mus musculus 
ST000192 | MetabolomicsWorkbench
Transcriptomicstrf4, trf5, and trf4-DADA mutant cells gene expression; Trf4p X-RIP-Chip
This SuperSeries is composed of the following subset Series: GSE16103: Wild-type versus trf4, trf5, and trf4-DADA mutant cells GSE16105: Trf4p in vivo crosslinking and ribonucleoprotein-immunopurification-chip analysis (X-RIP-Chip) Refer to individual Series
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-24 | E-GEOD-16107 | biostudies-arrayexpress
TranscriptomicsWild-type versus trf4, trf5, and trf4-DADA mutant cells
Measurement of the relative changes of gene expression of S. cerevisiae cells lacking either trf4 (trf4delta) or trf5 (trf5delta), and trf4delta/TRF4-DADA mutants compared to wild-type (WT) cells using yeast oligo microarrays that contain features representing all annotated yeast ORFs, ncRNAs, intro...
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-24 | E-GEOD-16103 | biostudies-arrayexpress
ProteomicsHDX-MS of the TRAMP Complex with tRNA
TRAMP is a eukaryotic protein complex with RNA helicase and polyadenylase activity that marks and delivers a variety of RNA substrates to the nuclear exosome for degradation. Prior work has characterized binding of Trf4 and Air2 to the helicase core of Mtr4 and the regulation of both enzymatic activ...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2024-12-11 | PXD053773 | Pride
Hdx Trf4 Tramp Air2 Rna Hdx-ms Mtr4 
GenomicsDrosophila Trf4-1 involvement in mRNA and primary miRNA transcription
Drosophila Trf4-1 involvement in mRNA and primary miRNA transcription
PRJNA524341 | ENA
TranscriptomicsTrf4p in vivo crosslinking and ribonucleoprotein-immunopurification-chip analysis (X-RIP-Chip)
In vivo cross-linking and ribonucleoprotein-immunopurification experiments followed by microarray analysis of bound RNAs (X-RIP-chip). Cells expressing recombinant tandem-affinity purification (TAP)-tagged Trf4 protein were cross-linked with formaldehyde, and Trf4-containing ribonucleoprotein comple...
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-24 | E-GEOD-16105 | biostudies-arrayexpress
TranscriptomicsWild-type versus trf4, trf5, and trf4-DADA mutant cells
Measurement of the relative changes of gene expression of S. cerevisiae cells lacking either trf4 (trf4delta) or trf5 (trf5delta), and trf4delta/TRF4-DADA mutants compared to wild-type (WT) cells using yeast oligo microarrays that contain features representing all annotated yeast ORFs, ncRNAs, intro...
ORGANISM(S): Saccharomyces cerevisiae 
2009-07-15 | GSE16103 | GEO
GenomicsDrosophila Trf4-1 involvement in mRNA and primary miRNA transcription
Drosophila Trf4-1 is a polyadenylation polymerase or terminal nucleotidyl transferase (PAP/TENT) that has been reported to add poly(A) tails to snRNAs in nucleus or mRNAs in cytoplasm. Here, we found that the loss of Trf4-1 resulted in the reduction of mRNAs and primary miRNAs (pri-miRNAs) in both D...
ORGANISM(S): Drosophila melanogaster 
2019-05-01 | GSE127210 | GEO
Genomicstrf4, trf5, and trf4-DADA mutant cells gene expression Trf4p X-RIP-Chip
trf4, trf5, and trf4-DADA mutant cells gene expression Trf4p X-RIP-Chip
PRJNA117217 | ENA
UnknownTrf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control.
Not available
S-EPMC2080816 | biostudies-literature
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