Wang Cheng C - OmicsDI

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Unknown (8637)
Proteomics (311)
Transcriptomics (120)
Genomics (50)
Metabolomics (45)
Multiomics (6)
Other (1)

Organisms

Homo sapiens (144)
Mus musculus (51)
Caenorhabditis elegans (22)
Rattus norvegicus (9)
Arabidopsis thaliana (7)
Oryza sativa (5)
Danio rerio (4)
Gallus gallus (4)
Saccharomyces cerevisiae (4)
Salmonella enterica subsp. enterica serovar Typhimurium (3)
Ovis aries (3)
Drosophila melanogaster (3)
Helicobacter pylori 26695 (2)
Severe acute respiratory syndrome coronavirus 2 (2)
Escherichia coli (2)
Brassica oleracea (1)
Salmonella enterica subsp. enterica serovar Paratyphi A (1)
Gossypium hirsutum (1)
Bombyx mori (1)
Prunus persica (1)
Brassica rapa (1)
Medicago truncatula (1)
Citrus sinensis (1)
Vitis vinifera (1)
Nicotiana tabacum (1)
Setaria italica (1)
Glycine max (1)
Oryza sativa Japonica Group (1)
Skeletonema dohrnii (1)
adeno-associated virus 5 (1)

Repository

pride (190)
biostudies-arrayexpress (155)
iProX (104)
MetaboLights (43)
EGA (16)
PeptideAtlas (8)
MassIVE (7)
GNPS (2)
GPMDB (1)
jPOST (1)
PAXDB (1)

Tissue

Cell culture (43)
Epithelial cell (13)
Brain (10)
Liver (9)
Testis (7)
Leaf (7)
Others (5)
Blood plasma (5)
Kidney (5)
Seed (4)
Root (4)
Whole body (4)
Hepatocyte (4)
Sperm (3)
Malignant cell (3)
Oocyte (3)
Macrophage (3)
Feces (3)
Abdominal adipose tissue (3)
B cell (3)
Colon (3)
Blood (3)
Male Reproductive System (2)
Nucleus pulposus cell of intervertebral disc (2)
Byssus (2)
Flower (2)
Plant cell (2)
Heart (2)
Stem cell (2)
Brain (1)

Disease

Disease free (6)
Prostate adenocarcinoma (5)
Breast cancer (5)
Non-alcoholic steatohepatitis (2)
Cholangiocarcinoma (2)
Lymphoma (2)
Brain cancer (2)
Malignant neoplasm of ovary (2)
Liver cancer (2)
Type 2 diabetes mellitus (2)
Acute leukemia (2)
Adenocarcinoma (1)
Not Available (1)
Enteritis (1)
Prostate neuroendocrine neoplasm (1)
Residual chronic schizophrenia (1)
Ankylosing spondylitis (1)
Major depressive disorder (1)
Scoliosis (1)
Bone osteosarcoma (1)
Esophagus squamous cell carcinoma (1)
Coronavirus infectious disease (1)
Skin melanoma (1)
Severe acute respiratory syndrome (1)
Systemic lupus erythematosus (1)
Cancer (1)
Melanoma (1)
Pancreatic cancer (1)
Degenerative disc disease (1)
Alzheimer's disease (1)

Technology Type

Mass Spectrometry (190)
Shotgun proteomics (86)
Mass spectrometry (38)
Bottom-up proteomics (36)
Data-dependent acquisition (25)
Affinity purification coupled with mass spectrometry proteomics (22)
Gel-based experiment (16)
Data-independent acquisition (8)
Top-down proteomics (8)
SWATH MS (5)
Mass spectrometry assay (4)
All-ion fragmentation (4)
Metaproteomics (3)
SRM/MRM (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Illumina HiSeq 2000, Illumina MiSeq (1)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Proteogenomics (1)
DiaPASEF (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (19)
Liquid Chromatography MS - negative - reverse phase (19)
Liquid Chromatography MS - positive - hilic (7)
Liquid Chromatography MS - negative - hilic (5)
MS:1000031 (3)
Liquid Chromatography MS - alternating - reverse phase (3)
Illumina HiSeq 2000 (2)
Agilent 5975C Series GC/MSD (2)
LTQ Orbitrap (2)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - (2)
Liquid Chromatography MS - positive (2)
FACS (1)
GeneChip® Fluidics Station 450 and GeneChip® Scanner 3000 (1)
Affymetrix 3'IVT Express Kit (1)
Agilent 2100 Bioanalyzer (1)
GenePix 4000B [Axon Instruments] (1)
BGISEQ-500 (1)
HiSeq X Ten (1)
Illumina HiSeq 1500 (1)
NextSeq 550 (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
LTQ FT (1)
MaXis (1)
Instrument (1)
Q Exactive (1)
Orbitrap Fusion Lumos (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)

Publication Date

2025 (51)
2023 (42)
2024 (38)
2014 (37)
2022 (36)
2021 (34)
2026 (29)
2016 (27)
2015 (27)
2011 (26)
2019 (21)
2018 (18)
2013 (18)
2012 (16)
2020 (14)
2010 (12)
2017 (6)
2009 (4)
2008 (2)
2007 (1)
2006 (1)
2004 (1)

UNIPROT ID/AC

M1B545_SOLTU (1)
M1AZD7_SOLTU (1)
M1BW10_SOLTU (1)
M1B8M2_SOLTU (1)
M1AYE0_SOLTU (1)
M0ZS50_SOLTU (1)
M1CQY1_SOLTU (1)
M1A5P7_SOLTU (1)
M0ZMC5_SOLTU (1)
M1ARW6_SOLTU (1)
M1D2H3_SOLTU (1)
M1BCB6_SOLTU (1)
M1C3E9_SOLTU (1)
M1A2Y2_SOLTU (1)
M1AXS6_SOLTU (1)
M1B6U8_SOLTU (1)
NDHJ_SOLTU (1)
M1AFH0_SOLTU (1)
M1A301_SOLTU (1)
M1C6M4_SOLTU (1)
M1C3L2_SOLTU (1)
M1CDG3_SOLTU (1)
M1D1S1_SOLTU (1)
M1D5Z7_SOLTU (1)
M1AM96_SOLTU (1)
M1E1A4_SOLTU (1)
M1BBZ5_SOLTU (1)
M0ZVJ8_SOLTU (1)
M1AP74_SOLTU (1)
M1ADS6_SOLTU (1)

ENSEMBL ID

ENSG00000170477 (6)
ENSG00000247315 (5)
ENSG00000147251 (5)
ENSG00000229353 (3)
ENSG00000214897 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:30769 (15)
CHEBI:16335 (14)
CHEBI:32816 (12)
CHEBI:15354 (12)
CHEBI:17822 (11)
CHEBI:15428 (11)
CHEBI:16704 (11)
CHEBI:17596 (11)
CHEBI:15756 (11)
CHEBI:17368 (11)
CHEBI:26271 (10)
CHEBI:15741 (10)
CHEBI:6650 (10)
CHEBI:28044 (10)
CHEBI:18183 (10)
CHEBI:16359 (10)
CHEBI:16737 (10)
CHEBI:16919 (10)
CHEBI:28716 (10)
CHEBI:16811 (9)
CHEBI:25017 (9)
CHEBI:28875 (9)
CHEBI:17568 (9)
CHEBI:16449 (9)
CHEBI:16411 (9)
CHEBI:17385 (9)
CHEBI:15971 (9)
CHEBI:29016 (9)
CHEBI:16015 (9)
CHEBI:18012 (9)

Metabolite Name

Leucine (8)
Valine (8)
Proline (8)
Ornithine (7)
Asparagine (7)
Serine (7)
Adenosine (7)
Phenylalanine (7)
Palmitic acid (7)
Glycine (6)
Glycine (6)
Uracil (6)
Choline (6)
Taurine (6)
Cholic acid (6)
Citric acid (6)
Alanine (6)
Linoleic acid (6)
Isoleucine (6)
Glutamine (6)
Uridine (6)
Creatine (6)
L-Tyrosine (6)
Inosine (6)
Choline (5)
Creatine (5)
Betaine (5)
Pantothenic acid (5)
Methionine (5)
Deoxycholic acid (5)

Study type

Transcription profiling by array (63)
RNA-seq of coding RNA (31)
ChIP-seq (26)
Methylation profiling by high throughput sequencing (8)
Other (7)
RNA-seq of non coding RNA (6)
Comparative genomic hybridization by array (3)
Methylation profiling by array (3)
ChIP-chip by tiling array (2)
RNA-seq of coding RNA from single cells (2)
Unknown experiment type (1)
Genotyping by array (1)
ATAC-seq (1)

Release Date

2025 (1379)
2022 (1154)
2023 (1061)
2024 (1034)
2021 (924)
2020 (638)
2019 (481)
2018 (423)
2017 (315)
2016 (287)
2015 (263)
2026 (204)
2014 (197)
2013 (123)
2012 (77)
2011 (69)
2010 (54)
2009 (49)
2008 (25)
2007 (11)
2006 (7)
2005 (6)
2004 (5)
2002 (4)
2003 (1)

Lab affiliation

Sichuan University (4)
XiangYa hospital of Central south university (3)
Faculty of Medicine, University of Ottawa, Ottawa, ON Canada (3)
State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Chemistry and Biomedicine Innovation Center (ChemBIC), Nanjing University, Nanjing, China. (2)
1 Interdisciplinary Research Center on Biology and Chemistry, State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China 2 Shanghai Academy of Natural Sciences (SANS), Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China (2)
1Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Central South University (2)
The Hong Kong University of Science and Technology (2)
State Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, China (2)
Mayo Clinic (2)
Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (2)
Nanjing University (2)
Jinan University (2)
West China Hospital,Sichuan University (2)
Second Hospital of Lanzhou University (1)
Department of Urology, Emory University School of Medicine, Atlanta, GA, USA (1)
Chemical and Biological Engineering Department, The Hong Kong University of Science and Technology (HKUST) (1)
Affiliated Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology (1)
State Key Laboratory of Quality Research in Chinese Medicine and Institute of Chinese Medical Sciences, University of Macau, Macau (1)
State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University (1)
The First Hospital of Jilin University (1)
Rheumatology Department, Affiliated Hospital of Nanjing University of Chinese Medicine, Nanjing, China (1)
Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, State Key Laboratory of Pathogen and Biosecurity, Key Laboratory of Jilin Province for Zoonosis Prevention and Control, Changchun, China. (1)
Institute of Biophysics,Chinese Academy of Sciences (1)
Institute of Bioengineering, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, Zhejiang 310027, China (1)
Department of Chemistry,Department of Life Sciences,National Cheng Kung University, Tainan, Taiwan (1)
The First Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, Jiangxi 330006, China. (1)
The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China. (1)
State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Innovation Academy for Seed Design, Chinese Academy of Sciences, Beijing 100101, China (1)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA (1)

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Dipsacus asperoides C. Y. Cheng et T. M. Ai, LC-MSMS

Pentacyclic triterpenes are a class of natural products that are present in Dipsacus asperoides with a long history of use. Pharmacological studies have shown that pentacyclic triterpenes have various biological activities. We have performed proteomic analysis in multiple tissues of this species to ...

ORGANISM(S): Dipsacus asperoides

2023-02-09 | PXD038580 | Pride

Lc-msms Dipsacus asperoides c. y. cheng et t. m. ai

c-di-GMP affect the protein acetylation through CobB dependent deacetylation

To determine whether c-di-GMP could affect CobB-dependent deacetylation in a global setting, we applied Stable Isotope Labeling with Amino acids in Cell culture (SILAC) coupled with MS to quantitatively compare the levels of protein acetylation in WT, ΔcobB and ΔdgcZ cells.

ORGANISM(S): Escherichia coli

2019-06-17 | PXD013292 | Pride

C-di-gmp cobb

Health Care Provider Practices and Perceptions During Family-Centered Rounds With Limited English-Proficient Families.

Not available

S-EPMC8267052 | biostudies-literature

Tricistronic hepatitis C virus subgenomic replicon expressing double transgenes.

Not available

S-EPMC4277965 | biostudies-literature

Protective Activities of Dendrobium huoshanense C. Z. Tang et S. J. Cheng Polysaccharide against High-Cholesterol Diet-Induced Atherosclerosis in Zebrafish.

Not available

S-EPMC7366212 | biostudies-literature

SILAC labeling efficiency for c-di-GMP and CobB

Description To determine whether c-di-GMP could affect CobB-dependent deacetylation in a global setting, we applied Stable Isotope Labeling with Amino acids in Cell culture (SILAC) coupled with MS to quantitatively compare the levels of protein acetylation in WT, ΔcobB and ΔdgcZ cells. Before that, ...

ORGANISM(S): Escherichia coli

2019-06-24 | PXD014344 | Pride

Silac c-di-gmp

Effect of memantine on C-reactive protein and lipid profiles in bipolar disorder.

Not available

S-EPMC7241092 | biostudies-literature

<i>Dendrobium huoshanense</i> C. Z. Tang & S. J. Cheng alleviates atherosclerosis by reducing lipid and improving vascular endothelial dysfunction.

Not available

S-EPMC12510864 | biostudies-literature

Regulation of blood-testis barrier assembly in vivo by germ cells.

Not available

S-EPMC6137450 | biostudies-literature