Wu Tao T - OmicsDI

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Unknown (824)
Proteomics (86)
Transcriptomics (27)
Genomics (9)
Metabolomics (8)
Multiomics (3)
Other (1)

Organisms

Homo sapiens (45)
Mus musculus (31)
Aerococcus urinae NBRC 15544 = CCUG 36881 (23)
Alteromonadales (23)
Bacteria (23)
Canis lupus familiaris (23)
Carya cathayensis (23)
Cnidaria (23)
Ectopseudomonas oleovorans CECT 5344 (23)
Ensifer adhaerens (23)
Enterococcus faecalis (23)
Globicatella sanguinis (23)
Halictus scabiosae (23)
Histomonas meleagridis (23)
Human immunodeficiency virus 1 (23)
Arabidopsis thaliana (2)
Caenorhabditis elegans (2)
Larix kaempferi (1)
Xenopus laevis (1)
Staphylococcus epidermidis (1)
Oryza sativa (1)
Saccharomyces cerevisiae (1)
Bos taurus (1)
Brassica napus (1)
Cricetulus griseus (1)
Macaca mulatta (1)
Schistosoma japonicum (1)
Sus scrofa (1)
Sus scrofa domesticus (1)
Zea mays (1)

Organisms

Homo sapiens (1)

Repository

iProX (42)
biostudies-arrayexpress (33)
pride (23)
PeptideAtlas (16)
MetaboLights (7)
MassIVE (5)
ENA (2)
EGA (1)
GNPS (1)
GPMDB (1)

Tissue

Plasma Non-glyco (11)
Cell culture (9)
Liver (4)
Others (3)
Blood plasma (3)
Male Reproductive System (2)
Stem cell (2)
Abscission zone (1)
Blood cell (1)
Brain (1)
Epithelial cell (1)
Macrophage (1)
T cell (1)
T-cell acute lymphoblastic leukemia cell (1)

Disease

Acute leukemia (2)
Breast cancer (2)
Not Available (1)
Brain glioblastoma multiforme (1)
Liver inflammation (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (23)
Shotgun proteomics (10)
Mass spectrometry (6)
Bottom-up proteomics (4)
Data-dependent acquisition (4)
Top-down proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-independent acquisition (2)
Mass spectrometry assay (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Proteogenomics (1)

Instrument Platform

LTQ Orbitrap Velos (15)
Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (3)
Orbitrap Fusion Lumos (2)
LTQ Orbitrap Elite (2)
Instrument (1)
LTQ Orbitrap (1)
Orbitrap Eclipse (1)
Q Exactive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
QExactive (1)

Publication Date

2025 (17)
2024 (16)
2015 (15)
2022 (15)
2014 (10)
2010 (9)
2021 (8)
2023 (6)
2026 (5)
2018 (5)
2012 (4)
2011 (3)
2009 (3)
2020 (3)
2019 (3)
2016 (2)
2013 (1)
2008 (1)
2007 (1)

UNIPROT ID/AC

A0A024RC46 (16)
A5A3E0 (16)
A6NNZ2 (16)
B3KML9 (16)
B4DHB3 (16)
B4DL86 (16)
B4DRV9 (16)
B4DY08 (16)
B4E3A4 (16)
C9JM50 (16)
E7EX29 (16)
G8JLB6 (16)
H0YM50 (16)
H7BZ94 (16)
I3L4N8 (16)
J3KPS3 (16)
J3QRK5 (16)
M0QZ52 (16)
O00299 (16)
O14556 (16)
O14818 (16)
O60812 (16)
O75369 (16)
O75369-8 (16)
O75694 (16)
O76013 (16)
O76015 (16)
O95678 (16)
P00338 (16)
P00338-3 (16)

ENSEMBL ID

ENSG00000170477 (16)
ENSG00000147251 (8)
ENSG00000247315 (5)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:18101 (3)
CHEBI:28918 (3)
CHEBI:47925 (3)
CHEBI:28483 (3)
CHEBI:15367 (3)
CHEBI:75145 (3)
CHEBI:18292 (3)
CHEBI:36090 (3)
CHEBI:22652 (3)
CHEBI:17780 (3)
CHEBI:16031 (3)
CHEBI:16393 (3)
CHEBI:31697 (3)
CHEBI:17650 (3)
CHEBI:16259 (3)
CHEBI:39567 (3)
CHEBI:21557 (3)
CHEBI:55328 (3)
CHEBI:28834 (3)
CHEBI:16359 (3)
CHEBI:43355 (3)
CHEBI:17405 (3)
CHEBI:48131 (3)
CHEBI:16704 (3)
CHEBI:17533 (3)
CHEBI:15891 (3)
CHEBI:16958 (3)
CHEBI:73722 (3)
CHEBI:17509 (3)
CHEBI:15971 (3)

Metabolite Name

Uracil (4)
Tetrahydrocortisone (4)
Cortisol (4)
Taurocholic acid (4)
Adenosine (4)
Progesterone (4)
Creatinine (4)
Hypoxanthine (4)
Isopalmitic acid (3)
[10]-Dehydrogingerdione (3)
Piperanine (3)
N-Acetyl-L-methionine (3)
Pyrrole-2-carboxylic acid (3)
Phenobarbital (3)
Stearoylethanolamide (3)
1-(2,6,6-Trimethyl-2-cyclohexen-1-yl)-1,6-heptadien-3-one (3)
4-Methyl-5-thiazoleethanol (3)
Propionylcarnitine (3)
Thymine (3)
16-Hydroxy hexadecanoic acid (3)
Phenylalanyl-Isoleucine (3)
Pilocarpine (3)
Quinoline (3)
Benzoic acid (3)
Succinic anhydride (3)
L-Histidine (3)
Cotinine (3)
Choline (3)
Gamma-Glutamylleucine (3)
Taurine (3)

First Public Date

2025 (2)

Study type

Transcription profiling by array (15)
ChIP-seq (6)
RNA-seq of coding RNA (5)
RNA-seq of non coding RNA (4)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)
Comparative genomic hybridization by array (1)

Release Date

2025 (146)
2024 (116)
2023 (114)
2022 (98)
2021 (94)
2020 (53)
2018 (44)
2019 (39)
2017 (26)
2015 (23)
2016 (21)
2014 (16)
2012 (12)
2010 (11)
2013 (10)
2026 (10)
2011 (7)
2009 (7)
2008 (4)
2007 (3)
2006 (1)
2005 (1)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (2)
Shanghai Center for Systems Biomedicine Shanghai Jiao Tong University (2)
1 Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China. 2 Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. 3 Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Acupuncture and Tuina School/Third Teaching Hospital, Chengdu University of Traditional Chinese Medicine (1)
Anonymity for double-blind review (1)
Central Laboratory, Wuxi Maternity and Child Health Care Hospital Affiliated to Nanjing Medical University (1)
Children's Hospital of Soochow University, Suzhou (1)
College of Horticulture, Nanjing Agricultural University, China (1)
Department of Biochemistry, Department of Chemistry, Purdue University, West Lafayette, IN 47906 (1)
Department of General Surgery, Key Laboratory of Hepatosplenic Surgery, Ministry of Education, The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Department of Hepatobiliary Surgery, Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. (1)
Department of biochemistry, Purdue University (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Institute of Pediatric Research, Children's Hospital of Soochow University, Suzhou, China. (1)
Kunming Institute of Botany, Chinese Academy of Sciences (1)
Nanjing Medical University (1)
National Center for Protein Sciences Beijing, State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Lifeomics, Beijing 102206, PR China (1)
Radiation Oncology Center, Chongqing University Cancer Hospital, Chongqing 400030, China. (1)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University (1)
Translational Biomedical Proteomics, Institute of Molecular and Cell Biology (IMCB), Singapore (1)
University of Science and Technology of China (1)

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A dual-functional Ta/TaO _x /Ru device with both nonlinear selector and resistive switching behaviors.

Not available

S-EPMC9033434 | biostudies-literature

Expression data from Th2 cell of ECM1 KO mice vs WT mice

CD4+ helper T cells are critical for immunological response. Th2 cells, a subset of CD4+ helper T cells, are responsible for asthma and other immune diseases. We found a Th2 secreted protein, ExtraCellular Matrix protein 1 (ECM1), which is highly induced by classic IL-4 signaling pathway during help...

ORGANISM(S): Mus musculus

2010-12-31 | E-GEOD-19707 | biostudies-arrayexpress

The trans-omics landscape of COVID-19

The outbreak of coronavirus disease 2019 (COVID-19) is a global health emergency. Various omics results have been reported for COVID-19, but the molecular hallmarks of COVID-19, especially in those patients without comorbidities, have not been fully investigated. Here we collect blood samples from 2...

2021-10-06 | MTBLS2542 | MetaboLights

Downregulation of KIF1B mRNA in hepatocellular carcinoma tissues correlates with poor prognosis.

Not available

S-EPMC4507112 | biostudies-literature

Association between Chloroplast and Mitochondrial DNA sequences in Chinese Prunus genotypes (Prunus persica, Prunus domestica, and Prunus avium).

Not available

S-EPMC4310034 | biostudies-literature

USP20 promotes T-ALL evolution by deubiquitinating modified HIF1A

Qualitative analysis of proteome is to study the types and quantities of proteome identified by samples under different conditions, and to perform functional analysis of the identified proteins, so as to provide reference information for quantitative and modification analysis of high-throughput prot...

ORGANISM(S): Homo sapiens (Human)

2025-10-13 | PXD053080 | Pride

Usp20 Hif1a

CXCR5+ Follicular Cytotoxic T cells Control Viral Infection in B Cell follicles

Lymphocytic Choriomeningitis Virus (LCMV) specific CD8+ T cells (P14) were transferred into congenic WT mice followed by LCMV(DOCILE) infection. CXCR5-expressing (CXCR5+) or CXCR5 non-expressing (CXCR5-) P14 were purified on day 8 after infection, and total mRNA were sequenced from these populations...

ORGANISM(S): Mus musculus

2016-07-31 | E-GEOD-76279 | biostudies-arrayexpress

Mechanism of interventional effect and targets of Zhuyu Pill in regulating and suppressing colitis and cholestasis

Zhuyu pill (ZYP) is a traditional Chinese medicine prescription composed of two drugs, Coptis chinensis Franch. and Tetradium ruticarpum (A. Jussieu) T. G. Hartley, and is commonly used in the clinical treatment of diseases of the digestive system. However, the mechanism underly...

2022-11-02 | MTBLS4980 | MetaboLights

Identification and Analysis of Dysfunctional Genes and Pathways in CD8+ T Cells of Non-Small Cell Lung Cancer Based on RNA Sequencing.

Not available

S-EPMC7227791 | biostudies-literature

Pan-Cancer Analysis Reveals Disrupted Circadian Clock Associates With T Cell Exhaustion.

Not available

S-EPMC6821711 | biostudies-literature

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955 Results

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Organisms

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Disease

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OmicsDI is part of the ELIXIR infrastructure

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