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MetabolomicsUnraveling the metabolic response of Brassica oleracea exposed to Xanthomonas campestris pv. campestris

BACKGROUND: Brassica crops together with cereals represent the basis of world supplies. Due to their importance, the production losses caused by Xanthomonas campestris pv. campestris (Xcc) infection represent a high economic impact. Understanding molecular and biochemical mechani...

2021-10-06 | MTBLS460 | MetaboLights
TranscriptomicsGene content or gene expression, which determines the difference in host specificity and virulence of strains of Xanthomonas citri subsp. citri?
Xanthomonas is one important model microbe to study the molecular determinants of virulence and host range of pathogens since Xanthomonas is capable of infecting numerous monocotyledonous and dicotyledonous plants. Among the plant diseases caused by Xanthomonas, X. citri subsp. citri (Xcc) causes c...
ORGANISM(S): Xanthomonas citri subsp. citri 
2013-09-05 | E-GEOD-41519 | biostudies-arrayexpress
TranscriptomicsTranscriptome Profiling of Xanthomonas oryzae pv. oryzae and Xanthomonas oryzae pv. oryzicola
This SuperSeries is composed of the following subset Series: GSE9640: Transcriptome Profiling of Xanthomonas oryzae pv. oryzae and Xanthomonas oryzae pv. oryzicola on two different medias GSE9643: Transcriptome Profiling of Xanthomonas oryzae pv. oryzae knockout mutants at different hybridization co...
ORGANISM(S): Xanthomonas oryzae pv. oryzae KACC10331 
2010-05-26 | E-GEOD-9658 | biostudies-arrayexpress
TranscriptomicsXanthomonas oryzae pv. oryzae (Indian Isolate): Wild type vs. rpfF mutant
Transcription profiling of the DSF regulon in Xanthomonas oryzae pv. oryzae (Xoo) using wild type and the rpfF mutant. Cell-cell signaling mediated by the quorum sensing molecule known as Diffusible Signaling factor (DSF) is required for virulence of Xanthomonas group of plant pathogens. DSF in diff...
ORGANISM(S): Xanthomonas oryzae pv. oryzae 
2011-04-02 | E-GEOD-27809 | biostudies-arrayexpress
ProteomicsComparative proteome analysis in different media using three Xanthomonas species
Purpose -Comparison of proteome incubated in different media (rich and minimal media) -Three Xanthomonas species were used (Xanthomonas oryzae pv. oryaze, X. campestris pv. vesicatoria, and X. axonopodis pv. glycines. -Shotgun proteomic was used
ORGANISM(S): Xanthomonas campestris pv. vesicatoria str. 85-10 Xanthomonas oryzae pv. oryzae (strain PXO99A) Xanthomonas axonopodis pv. glycines str. 8ra 
2017-10-23 | PXD006310 | Pride
Lc-msms Xanthomonas 
TranscriptomicsA transcriptome study of DSF-mediated quorum sensing in Xanthomonas axonopodis pv. citri
Quorum sensing (QS) in Xanthomonas axonopodis pv. citri, the causal agent of citrus canker, is mediated by a diffusible signal factor (DSF). QS is required for the full virulence of X. axonopodis pv. citri in planta. Mutations in rpfF, rpfC and rpfG, the core genes of QS, decreased the production of...
ORGANISM(S): Xanthomonas axonopodis pv. citri str. 306 
2012-04-26 | E-GEOD-29877 | biostudies-arrayexpress
ProteomicsProfiling proteins regulated by putative methyltransferases in Xanthomonas axonopodis pv. glycines str. 8ra
- Identification of proteins whose expression was affected by three putative methyltransferases in Xanthomonas axonopodis pv. glycines str. 8ra - Shotgun proteomic analysis was used - Four strains were used with three biological replicates (total 12 samples). One is the wildtype carrying an empty ve...
ORGANISM(S): Xanthomonas axonopodis pv. glycines str. 8ra 
2019-11-11 | PXD012590 | Pride
Xanthomonas axonopodis pv. glycines Label-free shotgun proteomics Methyltransferase 
TranscriptomicsA time-course transcriptome study of hrpG and hrpX regulons in Xanthomonas axonopodis pv. citri
Xanthomonas axonopodis pv. citri (XAC) is the causal agent of citrus canker which is one of the most serious diseases of citrus. To understand the virulence mechanism of XAC, we designed and conducted genome-wide microarray analyses to characterize the regulons of HrpG and HrpX, which are critical ...
ORGANISM(S): Xanthomonas axonopodis pv. citri str. 306 
2011-06-09 | E-GEOD-24016 | biostudies-arrayexpress
TranscriptomicsTranscriptomics of Xanthomonas campestris pv campestris in cabbage xylem sap
Xylem sap of young cabbage plantlets was recovered from root pressure exudation and used as a growth medium for the vascular pathogen Xanthomonas campestris pv campestris, the causative agent of the black rot of Brassicaceae.
ORGANISM(S): Xanthomonas campestris pv campestris 
2014-01-04 | E-MTAB-2290 | biostudies-arrayexpress
TranscriptomicsCassava sRNA libraries from non-infected and infected tissues with Xanthomonas axonopodis. pv manihotis
microRNAs can play a crucial role in stress response in plants, including biotic stress. Some miRNAs are known to respond to bacterial infection. This work has addressed the role of miRNAs in Manihot esculenta (cassava)-Xanthomonas axonopodis pv. manihotis (Xam) interaction. Illumina sequencing was ...
ORGANISM(S): Manihot esculenta 
2011-12-01 | E-GEOD-29379 | biostudies-arrayexpress
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