Xu Xiong X - OmicsDI

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Unknown (1710)
Proteomics (54)
Metabolomics (7)
Transcriptomics (6)
Genomics (3)
Other (1)

Organisms

Homo sapiens (34)
Mus musculus (18)
Escherichia coli (2)
Neisseria meningitidis (1)
Schizosaccharomyces pombe (1)
Chilo suppressalis (1)
Cotesia chilonis (1)
Oryctolagus cuniculus (1)
Riemerella anatipestifer RA-YM (1)
Brassica rapa var. rapa (1)
Saccharomyces cerevisiae (1)
Sipunculus nudus (1)

Repository

pride (31)
iProX (18)
biostudies-arrayexpress (9)
MetaboLights (7)
MassIVE (3)
PeptideAtlas (2)
GPMDB (1)

Tissue

Cell culture (9)
Embryonic stem cell (5)
Male Reproductive System (2)
Abdominal adipose tissue (2)
Brain (2)
Early embryonic cell (2)
Epithelial cell (2)
HeLa cell (2)
Testis (2)
Diploid cell (1)
Electrically active cell (1)
Heart (1)
Hepatocyte (1)
Leaf (1)
Liver (1)
Lung squamous cell carcinoma cell (1)
Neuron (1)
Plasma cell (1)
Prostate gland (1)
Sensory ganglion (1)
Small intestine (1)
Sperm (1)
Spleen (1)
Stem cell (1)
Stomach (1)
Stomach lumen (1)
Whole body (1)

Disease

Cervix carcinoma (2)
Disease free (2)
Not Available (1)
Neuropathic pain (1)
Stomach carcinoma (1)

Technology Type

Mass Spectrometry (31)
Shotgun proteomics (12)
Mass spectrometry (7)
Affinity purification coupled with mass spectrometry proteomics (5)
Chemical cross-linking coupled with mass spectrometry proteomics (5)
Data-dependent acquisition (5)
Gel-based experiment (5)
Bottom-up proteomics (2)
Top-down proteomics (2)
Mass spectrometry imaging (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive - reverse phase (5)
LTQ Orbitrap Velos (2)
Instrument (1)
LTQ Orbitrap (1)
Orbitrap Fusion Lumos (1)
Q Exactive (1)
Capillary electrophoresis MS - negative (1)
Capillary electrophoresis MS - positive (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2025 (14)
2023 (10)
2022 (8)
2024 (7)
2026 (6)
2015 (4)
2021 (4)
2014 (3)
2016 (3)
2011 (2)
2019 (2)
2020 (2)
2013 (1)
2012 (1)
2010 (1)
2018 (1)
2017 (1)

UNIPROT ID/AC

A0A024R563 (2)
A0A024R8H9 (2)
A0A024RAN2 (2)
A0A024RC46 (2)
A0A075B6P5 (2)
A0A087WT59 (2)
A0A087WTX5 (2)
A0A087WVW2 (2)
A0A087WVZ5 (2)
A0A087WWA5 (2)
A0A087WXI0 (2)
A0A087WYL9 (2)
A0A087X130 (2)
A0A087X1S3 (2)
A0A087X1V9 (2)
A0A087X232 (2)
A0A0A0MS07 (2)
A0A0A0MS51 (2)
A0A0A0MSA7 (2)
A0A0B4J1V0 (2)
A0A0C4DG89 (2)
A0AV96 (2)
A0AVF1 (2)
A0AVT1 (2)
A0FGR8 (2)
A0FGR8-2 (2)
A0FGR8-6 (2)
A0M8Q6 (2)
A0MZ66 (2)
A0N5G5 (2)

ENSEMBL ID

ENSG00000170477 (2)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000147251 (1)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16856 (3)
CHEBI:28044 (3)
CHEBI:30769 (3)
CHEBI:7916 (3)
CHEBI:10111 (2)
CHEBI:145278 (2)
CHEBI:15354 (2)
CHEBI:15741 (2)
CHEBI:15843 (2)
CHEBI:15864 (2)
CHEBI:15971 (2)
CHEBI:16027 (2)
CHEBI:16040 (2)
CHEBI:16077 (2)
CHEBI:16119 (2)
CHEBI:16235 (2)
CHEBI:16356 (2)
CHEBI:16547 (2)
CHEBI:16695 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16750 (2)
CHEBI:16828 (2)
CHEBI:168951 (2)
CHEBI:16914 (2)
CHEBI:173949 (2)
CHEBI:17450 (2)
CHEBI:17562 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)

Metabolite Name

(1S,2R,4R,8S)-p-Menthane-2,8,9-triol 2-glucoside (2)
(3S)-3-hydroxycyclocitral (2)
(4R)-4-Hydroxy-L-glutamic acid (2)
(7'R,8'R)-4,7'-Epoxy-3',5-dimethoxy-4',9,9'-lignanetriol 9'-glucoside (2)
(S)-3-Sulfonatolactate (2)
1,11-Undecanedicarboxylic acid (2)
1-(3-Methylbutanoyl)-6-apiosylglucose (2)
1-Octen-3-yl primeveroside (2)
10-Hydroxy-8-nor-2-fenchanone glucoside (2)
12-Oxo-20-trihydroxy-leukotriene B4 (2)
19-Noraldosterone (2)
19-Oxotestosterone (2)
2,3-dinor Prostaglandin E1 (2)
2-Ethyl-2-Hydroxybutyric acid (2)
2-Hydroxy-2,6,6-trimethylcyclohexanone (2)
2-n-Propyl-4-oxopentanoic acid (2)
20-Cooh ltb4 (2)
3,4-Methyleneazelaic acid (2)
3-beta-D-galactosyl-sn-glycerol (2)
3-hydroxy-3-methyl-Glutaric acid (2)
4,11,13,15-Tetrahydroridentin B (2)
4-(Glutamylamino) butanoate (2)
4-Hydroxy-3-methoxybenzenemethanol (2)
4-Hydroxy-5-(3',4',5'-trihydroxyphenyl)-valeric acid-O-methyl-O-glucuronide (2)
4-Hydroxyandrostenedione glucuronide (2)
4-Hydroxycinnamic acid (2)
4-Hydroxycyclohexylcarboxylic acid (2)
5-(2-Methylpropyl)tetrahydro-2-oxo-3-furancarboxylic acid (2)
5-Nonyltetrahydro-2-oxo-3-furancarboxylic acid (2)
5-Phenyl-1,3-oxazinane-2,4-dione (2)

Study type

RNA-seq of coding RNA (3)
Transcription profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
ChIP-seq (1)

Release Date

2025 (298)
2022 (243)
2024 (216)
2023 (204)
2021 (156)
2020 (147)
2019 (81)
2018 (71)
2017 (67)
2026 (53)
2016 (52)
2015 (43)
2014 (33)
2013 (22)
2012 (15)
2011 (8)
2010 (4)
2009 (1)
2008 (1)
2007 (1)
2006 (1)
2005 (1)
2004 (1)

Lab affiliation

Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders (Ministry of Education), Shanghai Jiao Tong University, Shanghai, China (2)
Key Laboratory of Cell Proliferation and Differentiation of the Ministry of Education, School of Life Sciences, Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China. (2)
Soochow University (2)
1Cancer Institute, the Second Affiliated Hospital, and Institute of Translational Medicine, Zhejiang University School of Medicine, Hangzhou 310029, China 2Cancer Center, Zhejiang University, Hangzhou 310058, China 3Research Center for Life Science and Human Health, Binjiang Institute of Zhejiang University, Hangzhou 310053, China (1)
BGI-shenzhen (1)
Center for Cell Lineage and Development, CAS Key Laboratory of Regenerative Biology, Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, GIBH-HKU Guangdong-Hong Kong Stem Cell and Regenerative Medicine Research Centre, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China. (1)
Chinese Academy of Sciences (1)
College of Pharmaceutical Sciences Soochow University Yunxuan Building 1328 199 Ren'ai Road, Suzhou, Jiangsu 215123, China (1)
Department of Gastrointestinal Surgery, Zhongshan Hospital of Xiamen University, School of Medicine, Xiamen (1)
Department of Gynecological Oncology National Clinical Research Centre for Obstetrics and Gynecology Cancer Biology Research Centre (Key Laboratory of the Ministry of Education) Tongji Hospital, Tongji Medical College Huazhong University of Science and Technology (1)
Department of Hepatobiliary and Pancreatic Surgery, the First Affiliated Hospital, Zhejiang University School of Medicine (1)
Department of Microbiology and Immunology Lineberger Cancer Center University of North Carolina, Chapel Hill (1)
Department of Neurology, The Second Affiliated Hospital (Xinqiao Hospital), Army Medical University (Third Military Medical University), Chongqing 400037, China (1)
Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, National Key Laboratory of Medical Molecular Biology & Department of Immunology, No 5 Dongdan Santiao, Dongcheng district, Beijing 100005, China (1)
Jiangxi Provincial Key Laboratory of Cell Precision Therapy, School of Basic Medical Sciences, Jiujiang University (1)
Key Laboratory of Cell Proliferation and Differentiation of the Ministry of Education, School of Life Sciences, Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China (1)
Kunming Institute of Botany, CAS (1)
Northwest University (1)
School of Life Science, Peking University (1)
School of Life Sciences ,Ji Xiong lab, Peking University, Beijing, China (1)
School of life science, Peking University, Beijing (1)
School of life science, Peking University,Beijing (1)
The Institute of Cancer Research (1)
Tongji University (1)
UC San Diego (1)
University of North Carolina, Department of Biochemistry and Biophysics (1)
Zhejiang University (1)
liaoning shenyang (1)

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Transcriptomic and metabolomic analyses reveal the differential accumulation of phenylpropanoids and terpenoids in hemp autotetraploid and its diploid progenitor

Background

Cannabis sativa, a dioecious plant that has been cultivated worldwide for thousands of years, is known for its secondary metabolites, especially cannabinoids, which possess several medicinal effects. In this study, we investigated the autopolyploidization effects on the biosynthes...

2023-09-21 | MTBLS6032 | MetaboLights

CN-CHPP 2015 Testis Project - Tissue-Based Proteogenomics Reveals that Human Testis Endows Plentiful Missing Proteins

The testis tissue-based trans-omics was a feasible approach to find more missing proteins (MPs) because it was reported higher gene expression found in testis tissues. Three testis tissues and two protein separation strategies were selected to quantitatively evaluate gene expression abundance at the...

ORGANISM(S): Homo sapiens (Human)

2015-11-03 | PXD002179 | Pride

GPR68 Is a Neuroprotective Proton Receptor in Brain Ischemia.

Not available

S-EPMC7678672 | biostudies-literature

Mycetia saxicola (Rubiaceae), a new species with cauliflory from limestone areas in Yunnan, China, supported by morphological and molecular data.

Not available

S-EPMC12706492 | biostudies-literature

Age-Dependent Changes in the Plasma Proteome of Healthy Adults

Human blood plasma is a complex which communicates with most parts of the body and reflects changes in the state of the organism, therefore identifying age-related biomarkers can help to predict and monitor age-related physiological decline and diseases, as well as to find new treatments for disease...

ORGANISM(S): Homo sapiens (Human)

2020-10-19 | PXD016199 | Pride

Aging healthy adults plasma proteomics tmt-lc-ms/ms

Comparative Performance of the MGISEQ-2000 and Illumina X-Ten Sequencing Platforms for Paleogenomics.

Not available

S-EPMC8521044 | biostudies-literature

Multiomic analysis of Cohesin reveals that ZBTB transcription factors contribute to chromatin interactions

One bottleneck in understanding the principles of 3D chromatin structures is caused by the paucity of known regulators. Cohesin is essential for 3D chromatin organization, and its interacting partners are candidate regulators. Here, we performed proteomic profiling of the Cohesin in chromatin and id...

ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse)

2023-06-05 | PXD028860 | Pride

Human Label-free Mouse Hek293ts Chip-ms Mescs

Sub-minute synthesis and modulation of β/λ-MxTi3-xO5 ceramics towards accessible heat storage.

Not available

S-EPMC11897413 | biostudies-literature

Host-inducible immunogenic sphingomyelinase-like protein, Lk73.5, of Leptospira interrogans.

Not available

S-EPMC321616 | biostudies-literature

Hepatitis B Virus X Protein Promotes Degradation of SMC5/6 to Enhance HBV Replication.

Not available

S-EPMC5078993 | biostudies-literature

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