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ProteomicsA genetic model for in vivo proximity labeling of the mammalian secretome
Yang R, Meyer AS, Droujinine I, Udeshi ND, Hu Y, Guo J, McMahon J, Carey DK, Xu C, Qiao F, Sha J, Qin S, Rocco D, Wohlschlegel J, Ting AY, Carr SA, Perrimon N, McMahon AP. 2022. Organ functions are highly specialized and interdependent. Tissue-specific secreted factors play a critical role in organ...
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2022-02-16 | MSV000088848 | MassIVE
ProteomicsThe cross-linking mass spectrometry (CX-MS) results of Human TIP60 complex (hTIP60)
Mammalian TIP60 is a multi-functional enzyme with histone acetylation and histone dimer exchange activities. It plays roles in diverse cellular processes including transcription, DNA repair, cell cycle control, and embryonic development. We performed structural study on human TIP60 complex with cryo...
ORGANISM(S): Homo sapiens (Human) 
2024-07-11 | PXD048625 | Pride
Human Tip60 Cx-ms 
ProteomicsStructure of nucleosome-bound human PBAF complex
BAF and PBAF are mammalian SWI/SNF family chromatin remodeling complexes that possess multiple histone/DNA-binding subunits and create nucleosome-depleted/free regions for transcription activation. Despite previous structural studies and recent advance of SWI/SNF family complexes, it remains incompl...
ORGANISM(S): Homo sapiens (Human) 
2023-03-11 | PXD036708 | Pride
Mass spectrometry analysis of acetylated nucleosome Pbaf Ncp Lc-ms 
UnknownPIC-Mediator in complex with +1 nucleosome (T40N)
Not available
EMPIAR-11553 | biostudies-other
ProteomicsMouse ovarian Proteomic analysis after Cigarette smoke exposure
A total of 30 days of exposure to cigarette smoke (CS) or indoor air was given to 8- 23 week-old female C57BL/6 mice, then proteomics analyses were used to determine the 24 impact of CS on ovarian reserve.
ORGANISM(S): Mus Musculus 
2023-12-21 | PXD048026 |
ProteomicsSerum Metabolomics Study of Non-Smoking Female Patients with Non-Small Cell Lung Cancer Using a Gas Chromatography−Mass Spectrometry
The incidence of non-smoking female patients with non-small cell lung cancer (NSCLC) is increasing in recent decades. However, the pathogenesis of patients is unclear and early diagnosis biomarkers are in urgent need. In this study, 136 non-smoking female subjects (65 patients with NSCLC, 6 patients...
ORGANISM(S): Homo Sapiens 
2019-03-04 | PXD012935 |
ProteomicsIdentification of SNHG9-binding proteins in Huh7 cells using RNA pull-down assay
This project aims to identify the specific proteins interacting with lncRNA SNHG9 in hepatoma cells. We performed RNA pull-down assays using biotin-labeled SNHG9 probes in Huh7 cell lysates, followed by mass spectrometry (LC-MS/MS) to analyze the pulled-down protein.
ORGANISM(S): Homo Sapiens 
2026-04-20 | PXD077375 |
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