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ProteomicsIP-MS:Protein precipitated by antisense (AS) DNA oligomers crossing the junction site of circNEIL3
To identify the circNEIL3 interacting protein, we performed RNA pull-down assays after transfecting into cells with biotin-labeled sense (S) or antisense (AS) DNA oligomers crossing the junction site of circNEIL3, and the pull-down proteins were subjected to SDS-PAGE and Coomassie blue staining. ~45...
ORGANISM(S): Homo sapiens (Human) 
2023-10-24 | PXD039394 | Pride
Rna-pulldown Gel-based proteomics Mda-mb-231 cell line 
UnknownSalicylic acid attenuates brassinosteroid signaling via protein de-S-acylation
Not available
S-SCDT-10_15252-EMBJ_2022112998 | biostudies-other
UnknownTranscriptome alterations in chicken HD11 cells with steady knockdown and overexpression of RIPK2 gene.
Not available
S-EPMC9660593 | biostudies-literature
ProteomicsA TMT- based comparative quantitative proteomics analysis was used to reveal the changes of plasma proteomics profiles between longevity subjects and non-longevity area participants in order to identify plasma proteins associated with glucose metabolism in longevity population
High blood glucose level is one of the main characteristics of diabetes mellitus (DM). It is speculated that longevity families may have certain advantages in blood glucose regulation. But till now, limited information on these items is reported. In this study, a TMT- based comparative quantitative ...
ORGANISM(S): Homo sapiens (Human) 
2023-03-11 | PXD032932 | Pride
Human plasma lc/msms tmt 
ProteomicsRoles of USP2/E2F4 axis in autophagic machinery essential for cancer progression
We investigated the potential proteins degraded by E2F4-induced autophagy via quantitative proteomics. To gain insight into protein partner essential for E2F4 stability, co-immunoprecipitation and mass spectrometry assays were performed.
ORGANISM(S): Homo Sapiens 
2021-11-19 | PXD029858 |
ProteomicsProteomic signatures in chronic obstructive pulmonary disease emphysematous phenotype
Chronic obstructive pulmonary disease (COPD) is a highly heterogeneous disease. Emphysematous phenotype is a type of most common and critical phenotype, which is characterized by progressive lung destruction and poor prognosis. However, the underlying mechanism of this structural damage has not been...
ORGANISM(S): Homo Sapiens 
2021-01-31 | PXD023900 |
ProteomicsProteomics analysis of glioma cells and astrocytes
Cell membranes harvested from U251 and primary healthy astrocytes were prepared for LC-MS/MS analysis. After analysis, we could obtain a pool of proteins, which were enriched in the U251 cell membrane sample rather than healthy astrocyte membrane sample.
ORGANISM(S): Homo Sapiens 
2022-01-06 | PXD030760 |
ProteomicsProteomics and Organoid Culture Reveal the Underlying Pathogenesis of Hashimoto's Thyroiditis
To understand Hashimoto's Thyroiditis and translate this knowledge to clinical applications, we took mass spectrometric analysis on thyroid tissue fine-needle puncture from HT patients and healthy people in an attempt to make a further understanding of the pathogenesis of Hashimoto's Thyroiditis.
ORGANISM(S): Homo Sapiens 
PXD028448 |
UnknownThe tomato genome sequence provides insights into fleshy fruit evolution.
Not available
S-EPMC3378239 | biostudies-literature
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