Zeng Shi S - OmicsDI

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Unknown (911)
Proteomics (27)
Metabolomics (18)
Transcriptomics (7)
Genomics (1)

Organisms

Homo sapiens (17)
Mus musculus (7)
Zea mays (2)
Pyricularia oryzae 70-15 (2)
Setaria italica (1)
Helicobacter pylori G27 (1)
Citrus sinensis (1)
Mycobacterium tuberculosis (1)
Oryza sativa (1)

Repository

pride (19)
MetaboLights (17)
biostudies-arrayexpress (7)
iProX (7)
EGA (1)
GNPS (1)
PAXDB (1)

Tissue

Cell culture (3)
Epithelial cell (3)
Cell suspension culture (2)
Leaf (2)
Mycelium (2)
Nasopharyngeal epithelial cell (2)
Adipose tissue (1)
Bone marrow (1)
Brain (1)
Glioblast (1)
Kidney (1)
Lung (1)
Plant cell (1)
Stem cell (1)
Umbilical cord (1)

Disease

Brain cancer (1)
Neck carcinoma (1)
Non-small cell lung carcinoma (1)

Technology Type

Mass Spectrometry (19)
Mass spectrometry (15)
Shotgun proteomics (7)
Data-dependent acquisition (4)
Bottom-up proteomics (3)
Mass spectrometry assay (2)
Affinity purification coupled with mass spectrometry proteomics (2)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
Mass spectrometry imaging (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (10)
Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive (2)
Illumina HiSeq 2500 (1)
LTQ FT (1)
MaXis (1)
Agilent 7890 (1)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (1)
Liquid Chromatography MS - Positive (LC-MS (Pos)) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2023 (9)
2024 (8)
2025 (7)
2022 (6)
2026 (5)
2015 (4)
2018 (4)
2012 (3)
2021 (3)
2016 (1)
2020 (1)
2019 (1)

UNIPROT ID/AC

2711.XP_006464469.1 (1)
2711.XP_006464485.1 (1)
2711.XP_006464486.1 (1)
2711.XP_006465039.1 (1)
2711.XP_006465481.1 (1)
2711.XP_006465554.1 (1)
2711.XP_006465598.1 (1)
2711.XP_006465717.1 (1)
2711.XP_006465764.1 (1)
2711.XP_006466032.1 (1)
2711.XP_006466189.1 (1)
2711.XP_006466240.1 (1)
2711.XP_006466243.1 (1)
2711.XP_006466346.1 (1)
2711.XP_006466347.1 (1)
2711.XP_006466348.1 (1)
2711.XP_006466352.1 (1)
2711.XP_006466586.1 (1)
2711.XP_006467060.1 (1)
2711.XP_006467330.1 (1)
2711.XP_006467511.1 (1)
2711.XP_006468195.1 (1)
2711.XP_006468459.1 (1)
2711.XP_006468477.1 (1)
2711.XP_006468930.1 (1)
2711.XP_006468931.1 (1)
2711.XP_006469038.1 (1)
2711.XP_006469071.1 (1)
2711.XP_006469105.1 (1)
2711.XP_006469136.1 (1)

CHEBI ID

CHEBI:16359 (5)
CHEBI:30769 (5)
CHEBI:15741 (4)
CHEBI:16551 (4)
CHEBI:18012 (4)
CHEBI:64563 (4)
CHEBI:15702 (3)
CHEBI:15756 (3)
CHEBI:16027 (3)
CHEBI:16119 (3)
CHEBI:16235 (3)
CHEBI:16335 (3)
CHEBI:16547 (3)
CHEBI:16634 (3)
CHEBI:16704 (3)
CHEBI:16708 (3)
CHEBI:16755 (3)
CHEBI:17191 (3)
CHEBI:17351 (3)
CHEBI:17489 (3)
CHEBI:17561 (3)
CHEBI:17716 (3)
CHEBI:17895 (3)
CHEBI:24266 (3)
CHEBI:27432 (3)
CHEBI:27997 (3)
CHEBI:28834 (3)
CHEBI:28865 (3)
CHEBI:30797 (3)
CHEBI:30887 (3)

Metabolite Name

Cholic acid (6)
Azelaic acid (3)
Caffeine (3)
Citric acid (3)
Deoxycholic acid (3)
Dodecanedioic acid (3)
Elaidic acid (3)
Fumaric acid (3)
Thymidine (3)
Tris(2-butoxyethyl) phosphate (3)
Uridine (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
12-Hydroxydodecanoic acid (2)
16-Hydroxyhexadecanoic acid (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
2-Hydroxycinnamic acid (2)
3-Hydroxybutyric acid (2)
3-Phenyllactic acid (2)
4-Hydroxybenzaldehyde (2)
4-Methyl-5-thiazoleethanol (2)
4-Pyridoxic acid (2)
5,7-Dihydroxychromone (2)
5-Aminovaleric acid (2)
5-Hydroxyindole-3-acetic acid (2)
9(10)-EpOME (2)
9-Oxo-10E,12Z-octadecadienoic acid (2)
Adenine (2)
Adenosine (2)

Study type

Transcription profiling by array (4)
RNA-seq of coding RNA (3)

Release Date

2025 (168)
2024 (143)
2022 (126)
2021 (110)
2023 (98)
2020 (61)
2019 (42)
2018 (33)
2017 (28)
2015 (25)
2026 (25)
2016 (18)
2013 (13)
2012 (9)
2014 (8)
2011 (3)
2010 (2)
2007 (2)
2009 (1)
2008 (1)
2005 (1)
2004 (1)

Lab affiliation

College of Agronomy, Jiangxi Agricultural University (2)
Division of Nephrology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology (2)
School of Life Science, Fudan University (2)
Boston Children's Hospital | Harvard Medical School (1)
Cancer Research Institute and School of Basic Medicine Sciences, Central South University, Changsha, Hunan, China (1)
Cancer Research Institute, School of Basic Medical Science, Central South University (1)
Cancer Research Institute, Xiangya Basic Medical College, Central South University, No. 110 Xiangya Road, Kaifu District, Changsha City, Hunan Province (1)
Cancer Research UK Manchester Institute Transcriptional Networks in Lung Cancer Group (1)
Capital institute of Pediatrics. (1)
Department of Plant Pathology University of California-Davis One Shield Avenue, Davis, CA 95616 (1)
HUST (1)
Jiangxi Agricultural University (1)
MOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China (1)
School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, Guangdong, China (1)
Shanghai Institue of Materia and Medica, CAS (1)
The First Affiliated Hospital, Sun Yat-sen University (1)

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Anomalous negative fluorescence anisotropy in yellow fluorescent protein (YFP 10C): quantitative analysis of FRET in YFP dimers.

Not available

S-EPMC2570256 | biostudies-literature

Three new species of Macrostomum (Platyhelminthes, Macrostomorpha) from China and Australia, with notes on taxonomy and phylogenetics.

Not available

S-EPMC9848920 | biostudies-literature

Human nasopharyngeal cancer cell HONE1 FOXP1 immunoprecipitates LC-MS

Identification of peptides matching to LCK in FOXP1 immunoprecipitates from HONE1 cells by mass spectrometry

ORGANISM(S): Homo sapiens (Human)

2022-04-04 | PXD031014 | Pride

Adapalene Inhibits Prostate Cancer Cell Proliferation In Vitro and In Vivo by Inducing DNA Damage, S-phase Cell Cycle Arrest, and Apoptosis.

Not available

S-EPMC8902295 | biostudies-literature

A Novel Artificial Neuron-Like Gas Sensor Constructed from CuS Quantum Dots/Bi₂S₃ Nanosheets.

Not available

S-EPMC8639894 | biostudies-literature

BACKGROUND: Lactation is extremely important for dairy cows; however, the understanding of the underlying metabolic mechanisms is very limited. This study was conducted to investigate the inherent metabolic patterns during lactation using the overall biofluid metabolomics and the...

2018-03-16 | MTBLS411 | MetaboLights

Gene expression profiles of nasopharyngeal carcinoma cell line HNE2 following TP53 overexpression

Recent studies have revealed that long non-coding RNAs (lncRNAs) participate in all steps of cancer initiation and progression by regulating protein coding genes at the epigenetic, transcriptional and post-transcriptional levels. LncRNAs are in turn regulated by other genes, forming a complex regula...

ORGANISM(S): Homo sapiens

2015-05-14 | E-GEOD-60379 | biostudies-arrayexpress

3-Isopropyl-2-p-tol-yloxy-5,6,7,8-tetra-hydro-1-benzothieno[2,3-d]pyrimidin-4(3H)-one.

Not available

S-EPMC2977812 | biostudies-literature

Characterization of active peptides derived from three leeches and comparison of their anti-thrombotic mechanisms using the tail vein thrombosis model in mice and metabonomics

BACKGROUND AND AIMS: The increasing incidence of cardiovascular diseases has created an urgent need for safe and effective anti-thrombotic agents. Leech, as a traditional Chinese medicine, has the effect of promoting blood circulation and removing blood stasis, but its real mater...

2024-01-18 | MTBLS9306 | MetaboLights

Structural insights into Pot1-ssDNA, Pot1-Tpz1 and Tpz1-Ccq1 Interactions within fission yeast shelterin complex.

Not available

S-EPMC9333443 | biostudies-literature

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964 Results

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