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UnknownFei-Yan-Qing-Hua decoction attenuates influenza virus infection by enhancing host antiviral response through microbiota-derived acetate.
Not available
S-EPMC11499185 | biostudies-literature
MetabolomicsMetabolomics and Proteomics Reveal the Inhibitory Effect of Lactobacillus crispatus on Cervical Cancer Cells
Cervical cancer remains a significant global health issue due to its high morbidity and mortality rates. Recently, Lactobacillus crispatus has been recognized for its crucial role in maintaining cervical health. While some studies have explored the use of L. crispatus to mitigate cervical cancer, th...
2024-09-05 | MTBLS10498 | MetaboLights
ProteomicsSTXBP5 prevents reannealing of autophagic cis-SNARE disassembled by NSF/αSNAP
We generated a HEK293 cell line expressing ZZ-TEV-FLAG-bait protein by Lipofectamine 3000 transfection. The expression level of bait protein is controlled to endogenous level by addition of 2 ng/mL doxycycline. Note the combined treatment of Torin1 and CQ was applied for STX17. The tandem affinity p...
ORGANISM(S): Homo sapiens (Human) 
2023-09-18 | PXD043048 | Pride
Stxbp5 Alphasnap Autophagy Disassemble Snare Nsf 
ProteomicsStrategies to enable large-scale proteomics for reproducible research.
An experiment was designed to assess the reproducibility of SWATH-MS measurements collected from different mass spectrometers in a single facility over a period spanning approximately four months. Data were acquired with 90-minute gradient lengths at the Australian Cancer Research Foundation Interna...
ORGANISM(S): Homo sapiens (Human) Saccharomyces cerevisiae (Baker's yeast) 
2020-07-20 | PXD015912 | Pride
Swath  dia  mass spectrometry  reproducibility  procan 
ProteomicsProteomic-based computational stratification of intermediate-risk prostate cancer patients.
Gleason grading is an important prognostic indicator for prostate adenocarcinoma and is crucial for patient treatment decisions. However, intermediate-risk patients diagnosed in Gleason Grade Groups (GG) 2 and GG3 can harbour either aggressive or non-aggressive disease, resulting in under- or over-t...
ORGANISM(S): Homo sapiens (Human) 
2023-11-30 | PXD041005 | Pride
Survival analysis Mass spectrometry Swath-ms Data analysis Prostate adenocarcinoma Gleason grading 
ProteomicsPan-cancer proteomic map of 949 human cell lines (ProCan-DepMapSanger)
This pan-cancer cell line proteomic atlas comprises proteomic data acquired by data independent acquisition (specifically, SWATH) mass spectrometry for 949 cancer cell lines. Cell lines were processed in technical triplicate, with duplicates acquired on different mass spectrometers, alongside HEK293...
ORGANISM(S): Homo sapiens (Human) 
2022-07-13 | PXD030304 | Pride
Proteomics Dia Swath Cancer Cell line 
UnknownAberrant expression of long non-coding RNAs in peripheral blood mononuclear cells isolated from patients with gouty arthritis.
Not available
S-EPMC6704489 | biostudies-literature
Proteomics,MultiomicsCHPP chr 1,8,20 proteome dataset using the HCC cell lines of MHCC97H and HCCLM3, instrument is Q Exactive, part 1 of 3
The fresh cells as described above were harvested and lysed in buffer containing 8 M Urea, 50 mM NH4HCO3 and 5 mM IAA. The total cell lysates were centrifuged with 12,000 g for 10 min at 4 degrees Celsius to remove cell debris, and 1.5 mg proteins for each cell line were followed by sequential in-s...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-10-20 | MSV000080255 | MassIVE
Proteomics,MultiomicsCHPP chr 1,8,20 proteome dataset using the HCC cell lines of Hep3B and MHCC97H, instrument is Q Exactive, part 2 of 3
The fresh cells as described above were harvested and lysed in buffer containing 8 M Urea, 50 mM NH4HCO3 and 5 mM IAA. The total cell lysates were centrifuged with 12,000 g for 10 min at 4 degrees Celsius to remove cell debris, and 1.5 mg proteins for each cell line were followed by sequential in-so...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-10-20 | MSV000080254 | MassIVE
UnknownIdentification of the Impurities in Bopu Powder® and Sangrovit® by LC-MS Combined with a Screening Method.
Not available
S-EPMC8270340 | biostudies-literature
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