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MetabolomicsCharacterization of Phytoplankton-Excreted Metabolites Mediating Carbon Flux through the Surface Ocean

The marine labile dissolved organic carbon (DOC) pool is a dynamic reservoir of thousands of molecules. After excretion or release by phytoplankton and other microbes, metabolites are rapidly consumed, resulting in very low standing concentrations (picomolar to low nanomolar). To date, marine phy...

2026-03-17 | MTBLS12895 | MetaboLights
ProteomicsQuantitative proteomic and phosphoproteomic profiling of Sh3rf3-deficient ASD mouse model via 6Plex-TMT and phosphoproteomic
This study aims to systematically investigate the molecular mechanisms underlying autism spectrum disorder (ASD) by analyzing the proteome and phosphoproteome of a Sh3rf3-deficient mouse model. SH3RF3 (SH3 domain-containing RING finger protein 3) is implicated in synaptic regulation pathways, yet it...
ORGANISM(S): Mus musculus (Mouse) 
2026-03-23 | PXD061722 | Pride
Prefrontal cortex Mouse Ms Sh3rf3 
ProteomicsIdentification of Sh3rf3-interacting proteins in mouse prefrontal cortex by immunoprecipitation mass spectrometry
Sh3rf3 is an ASD-associated gene,Sh3rf3 deficiency reduces excitatory synaptic strength in prefrontal cortex and decreases the readily releasable vesicle pool and attenuated vesicle replenishment.To delve into the underlying mechanisms for impaired excitatory transmission, we performed immunoprecipi...
ORGANISM(S): Mus musculus (Mouse) 
2026-03-23 | PXD061685 | Pride
Prefrontal cortex Mouse Ip-ms Sh3rf3 
ProteomicsSK07_CatharanthusRoseus_Phosphoproteomics
Quantitative phosphoproteomic analysis unravels metabolism regulation of indole alkaloid biosythesis in Catharanthus roseus under ultraviolet-B radiation
ORGANISM(S): Catharanthus Roseus 
2019-09-19 | PXD013575 | JPOST Repository
ProteomicsIdentification of phenanthrene transfer proteins in xylem sap
The differentially expressed proteins in wheat xylem sap after phenanthrene exposure were screened by the threshold (fold change≥1.5 for up-regulation or ≤ 0.67 for down-regulation, P<0.05). Peroxidase (A0A3B5XXD0) was significantly decreased after phenanthrene exposure (fold change≤0.67, P<0.05). B...
ORGANISM(S): Triticum Aestivum 
2021-09-15 | PXD028208 |
ProteomicsTissue-Characteristic Expression of Mouse Proteome
264 DDA files corresponding to 36 mouse organs; PulseDIA data profiling of 41 male mouse organs and nine pairs of organs
ORGANISM(S): Mus Musculus 
2022-08-25 | PXD036255 |
ProteomicsProteomics Landscape of Diverse Serological Patterns in COVID-19
Serological test is a powerful tool to help clinicians assess the patients’ status during COVID-19 treatment. Highly diverse serological outcomes as exemplified by the negative or overly high IgG and IgM expressions are frequently reported but never elucidated interpreted with molecular insights. We...
ORGANISM(S): Homo Sapiens 
2023-01-27 | PXD039722 |
ProteomicsB7-H3 interactome in HaCaT cells by IP/MS
Immunoprecipitation coupled with mass spectrometry (IP/MS) was performed in HaCaT cells using an anti-B7-H3 antibody to identify B7-H3-interacting proteins. Raw mass spectrometry data are provided.
ORGANISM(S): Homo Sapiens 
PXD078471 |
ProteomicsMass-spectroscopic quantification of CHAC1-regulated protein cysteine S-glutathionylation
S-glutathionylation is an important post-translational modification of a cysteine residue of target protein. We applied a quantitative redox proteomics approach to identify the specific cysteine residues as targets of S-glutathionylation. Using this approach, we profiled CHAC1-associated changes in ...
ORGANISM(S): Mus Musculus 
2024-03-12 | PXD050569 |
ProteomicsPulmonary and Renal Long COVID at Two-year Revisit
To outline the temporal changes of long COVID, we profiled serum proteomes (dataset SP2) and urine proteomes (dataset UP2). The SP2 were measured for 37 patients during the disease (T1), the convalescence (T2), and at the 1-year revisit (T3); the UP2 were measured for 28 patients during the disease ...
ORGANISM(S): Homo Sapiens 
PXD027557 |
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