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ProteomicsExoproteomics of emetic Bacillus cereus in groundwater.
This project contributes to the proteomic comparison of one asporogenic variant of emetic Bacillus cereus and its parental strain grown and harvested after 24 and 72h incubation in groundwater.
ORGANISM(S): Bacillus cereus AH187 
2022-04-23 | PXD018955 | Pride
Emetic bacillus cereus Bacteria Shotgun proteomics Groundwater Asporogenic variant 
ProteomicsExoproteomics of emetic Bacillus cereus grown at low and high temperature.
This project contributes to the proteomic comparison of the dynamics of emetic Bacillus cereus grown at low (16°C) and high (30°C) temperature.
ORGANISM(S): Bacillus cereus AH187 
2021-09-09 | PXD020456 | Pride
Virulence Dynamics of exoproteome. Emetic bacillus cereus Bacteria Toxins Shotgun proteomics 
ProteomicsMolecular characterization of Histomonas meleagridis exoproteome with emphasis on protease secretion and parasite-bacteria interaction
Exoproteome from parasitic protists constitutes of extracellular proteins which play a fundamental role in multifactorial host-parasite interactions. Lytic factors, especially secreted proteases in extracellular milieu, are capable to modulate tissue invasion, thereby aggravating host susceptibility...
ORGANISM(S): Histomonas meleagridis 
2019-02-11 | PXD012037 | Pride
Histomonas meleagridis  exoproteome profiling  protein secretion  shotgun exoproteomics  proteases  protease inhibitor  protozoa  microbial microenvironment  pathogenesis  virulence factors 
ProteomicsReanalysis of PXD012038: "Molecular characterization of Histomonas meleagridis exoproteome with emphasis on protease secretion and parasite-bacteria interaction - SWATH dataset"
Exoproteome from parasitic protists constitutes of extracellular proteins which play a fundamental role in multifactorial host-parasite interactions. Lytic factors, especially secreted proteases in extracellular milieu, are capable to modulate tissue invasion, thereby aggravating host susceptibility...
ORGANISM(S): Histomonas meleagridis 
2023-03-11 | PXD034834 | Pride
Microbial microenvironment Exoproteome profiling Protease inhibitor Proteases Protein secretion Shotgun exoproteomics Protozoa Virulence factors Pathogenesis 
ProteomicsMolecular characterization of Histomonas meleagridis exoproteome with emphasis on protease secretion and parasite-bacteria interaction - SWATH dataset
Exoproteome from parasitic protists constitutes of extracellular proteins which play a fundamental role in multifactorial host-parasite interactions. Lytic factors, especially secreted proteases in extracellular milieu, are capable to modulate tissue invasion, thereby aggravating host susceptibility...
ORGANISM(S): Histomonas meleagridis 
2019-02-11 | PXD012038 | Pride
Histomonas meleagridis  exoproteome profiling  protein secretion  shotgun exoproteomics  proteases  protease inhibitor  protozoa  microbial microenvironment  pathogenesis  virulence factors 
ProteomicsNovel mechanisms for phosphate acquisition in abundant rhizosphere-dwelling Bacteroidetes
Global food production is reliant on the application of finite phosphorus (P) fertilisers. Numerous negative consequences associated with intensive P fertilisation have resulted in a high demand to find alternative sustainable methods that will enhance crop P uptake. Bacteroidetes, primarily from th...
ORGANISM(S): Flavobacterium sp. 316 
2021-09-08 | PXD014380 | Pride
Exoproteomics Oilseed rape Bacteroidetes Rhizosphere 
Proteomicsjellyfish detritus degrading microbiome
Jellyfish blooms represent a significant, but largely overlooked, source of labile organic matter (jelly-OM) in the ocean, characterized by high protein content with a low C:N ratio. The bloom-decay cycle of jellyfish in coastal waters are important vehicles for carbon export to the ocean’s interior...
ORGANISM(S): Escherichia coli 
2023-10-24 | PXD036989 | Pride
Jellyfish Metagenomics Detritus Microbes Exoproteomics Metaproteomics 
ProteomicsMetaexoproteomics identifies active plant-microbe interactions operating in the rhizosphere - part2
Advances in DNA sequencing technologies has drastically changed our perception of the structure and complexity of the plant microbiome. By comparison, our ability to accurately identify the metabolically active fraction of soil microbiota and its specific functional role in augmenting plant health i...
ORGANISM(S): Pseudomonas putida (strain BIRD-1) 
2022-07-01 | PXD033802 | Pride
Metaproteomics Warwick_rtp 
ProteomicsMetaexoproteomics identifies active plant-microbe interactions operating in the rhizosphere
Advances in DNA sequencing technologies has drastically changed our perception of the structure and complexity of the plant microbiome. By comparison, our ability to accurately identify the metabolically active fraction of soil microbiota and its specific functional role in augmenting plant health i...
ORGANISM(S): soil metagenome 
2022-07-01 | PXD033692 | Pride
Warwick_rtp Metaexoproteomics Lc-ms/ms 
ProteomicsMetaexoproteomics identifies active plant-microbe interactions operating in the rhizosphere - part3
Advances in DNA sequencing technologies has drastically changed our perception of the structure and complexity of the plant microbiome. By comparison, our ability to accurately identify the metabolically active fraction of soil microbiota and its specific functional role in augmenting plant health i...
ORGANISM(S): Brassica napus (Rape) 
2022-07-01 | PXD033803 | Pride
Metaproteomics Warwick_rtp 
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