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UnknownDe Novo transcriptome combined with physiological analyses revealed key genes for cadmium accumulation in Zhe-Maidong (Ophiopogon japonicus).
Not available
S-EPMC9791205 | biostudies-literature
MetabolomicsTranscriptomic and metabolomic comparison of two Kandelia obovata cultivas in response to cold wave
Temperature is the primary environmental factor that restricts the growth and distribution of mangrove plants. With the escalating severity of global climate change, Kandelia obovata has gained widespread recognition as an ideal species for investigating the response mechanisms of mangroves to cold ...
2024-09-27 | MTBLS9845 | MetaboLights
TranscriptomicsMicroarray analysis for the Mode-of-Action study of resveratrol in fission yeast
An increasing number of studies have shown that the promising compound resveratrol treats multiple diseases, such as cancer and aging; however, the resveratrol mode-of-action (MoA) remains largely unknown. Here, by virtue of multiple omics approaches, we adopted fission yeast as a model system with ...
ORGANISM(S): Schizosaccharomyces pombe 972h- 
2016-05-18 | E-MTAB-4399 | biostudies-arrayexpress
UnknownAdvancements in Medical Radiology Through Multimodal Machine Learning: A Comprehensive Overview.
Not available
S-EPMC12108733 | biostudies-literature
UnknownThe role and mechanism of "eight famous herbals in Zhejiang" in cancer via network pharmacology and experimental validation.
Not available
S-EPMC11612504 | biostudies-literature
ProteomicsIdentification of biomarkers of central nervous system damage in mice of benzene poisoning based on TMT proteomics
Benzene is known to be a common toxic industrial chemical, and prolonged benzene exposure may cause nervous system damage. At present, there were few studies on benzene-induced neurological damage. This research aimed to identify protein biomarkers to predict central nervous system damage of benzene...
ORGANISM(S): Mus musculus (Mouse) 
2025-05-06 | PXD046028 | Pride
Benzene poisoning  tmt proteomic  brain  mice 
ProteomicsMass spectrometry-based proteomic landscape of rice reveals a post-transcriptional regulatory role of N6-methyladenosine
Rice is one of the most important staple food and model species in plant biology, yet the quantitative proteomes of rice are largely uncharacterized. Here we quantify the relative protein levels of over 15,000 genes across rice major tissues using a tandem mass tag strategy followed by intensive fra...
ORGANISM(S): Oryza sativa (Rice) 
2024-05-01 | PXD041188 | Pride
Rice proteomic 
ProteomicsIdentifying interaction partners of noncanonical peptides.
Studies have revealed dozens of functional peptides in putative ‘noncoding’ regions and raised the question of how many proteins are encoded by noncanonical open reading frames (ORFs). We comprehensively annotated genome-wide translated ORFs across five eukaryotic by analyzing ribosome profiling rea...
ORGANISM(S): Homo sapiens (Human) 
2024-05-23 | PXD037658 | Pride
Human Interaction protein Mass spectrometry Noncanonical open reading frames (ncorfs) Peptide 
ProteomicsEMP1 preserves hematopoietic stem cell potential under homeostasis and radiation-induced injury by alleviating ER stress
To illustrate EMP1-interacting proteins, we performed co-immunoprecipitation (co-IP) followed by mass spectrometry using HSPCs (Lin-c-Kit+) to characterize protein interactomes of EMP1. Murine HSPCs (Lin-c-Kit+) were infected with retrovirus to force EMP1 overexpression (with HA tag). Then IgG or HA...
ORGANISM(S): Mus musculus (Mouse) 
2025-03-13 | PXD055884 | Pride
Hspcs Emp1 
UnknownSpatial-temporal dynamics of HZ prevalence among high-risk groups: a global multiregional cohort analysis since 1990.
Not available
S-EPMC12821962 | biostudies-literature
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