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Proteomicsc-JUN interacte with NuRD complex to regulate chromatin remodeling
detect c-JUN interaction proteins in humanembryonic stem cells
ORGANISM(S): Homo Sapiens 
2023-12-28 | PXD048153 |
UnknownDouble strain-release enables formal C-O/C-F and C-N/C-F ring-opening metathesis.
Not available
S-EPMC11310891 | biostudies-literature
TranscriptomicsTranscriptome analysis reveals global regulation in response to CO2 supplementation in oleaginous microalga Coccomyxa subellipsoidea C-169
The microalga Coccomyxa subellipsoidea C-169 possesses some features that may be valuable for lipid production, and, as demonstrated in this study, can be greatly induced to produce a high amount of fatty acid by CO2 supplementation. Here we have compared the transcriptome of air group (AG, cells cu...
ORGANISM(S): Coccomyxa subellipsoidea C-169 
2016-05-17 | E-GEOD-76638 | biostudies-arrayexpress
ProteomicsCarboxypeptidase B-assisted charge-based fractional diagonal chromatography for deep screening of C-terminome
The determination of protein C-termini is of great significance for protein function annotation and proteolysis re-search. However, the progress of C-terminomics is still far behind its counterpart, N-terminomics, because of the low reactivity of the carboxyl group. Herein, we developed a negative s...
ORGANISM(S): Homo sapiens (Human) Escherichia coli 
2020-05-25 | PXD018520 | Pride
Chafradic Cleavage site C-terminomic Caspase 
GenomicsHOT regions are CpG dense promoters in C. elegans and humans
ChIP seq of Cfp-1 and H3K4me3 in C. elegans late embryos The coding region of F52B11.1a (cfp-1) was PCR amplified from N2 genomic DNA using Phusion polymerase (Finnzymes) and Gateway cloned into pDONR221. The cfp-1 coding region was then recombined into the MosSCI compatible vector pCFJ201 (which ...
ORGANISM(S): Caenorhabditis elegans 
2014-01-01 | E-GEOD-49870 | biostudies-arrayexpress
ProteomicsPhosphoproteome of Hepatitis C Virus infected Huh7.5.1 cells
This project enriched and identified phosphoproteins in human hepatocarcinoma 7.5.1 cell line (Huh7.5.1) upon Hepatitis C virus (HCV) infection.
ORGANISM(S): Homo sapiens (Human) Recombinant Hepatitis C virus J6/JFH1-J6 
2016-07-08 | PXD000988 | Pride
Hepatitis c virus Phosphoproteome 
ProteomicsDual-Resolving of Positional and Geometric Isomerism of C=Cs via Bifunctional Visible-light-activated Photocycloaddition-Photoisomerization Reaction System
The biological functions of lipids largely depend on their chemicalspatial structures. The position and configuration of C=C bonds are two of the essential attributes that determine the structures of unsaturated lipids. However, simultaneous identification of both attributes remains challenging. Her...
ORGANISM(S): Homo Sapiens Arabidopsis Thaliana 
2022-02-19 | PXD031819 |
TranscriptomicsDefining the Roles and Regulation of the GATA-factor ELT-2 in the C. elegans Endoderm
We identified genome-wide sites of occupancy for the intestine-specific transcription factor ELT-2 in L3-staged N2 worm by performing ELT-2 ChIP-seq on whole worms; we performed RNA-seq on L3-staged N2 whole worms To identify DNA regions of direct ELT-2 occupancy, we performed the following ChIP-seq...
ORGANISM(S): Caenorhabditis elegans 
2016-03-30 | E-GEOD-71720 | biostudies-arrayexpress
ProteomicsA suite of tools for the study of tryptophan C-mannosylation
Tryptophan C-mannosylation is a co-translational modification unique to the metazoans and apicomplexan parasites. It is the only example of protein C-glycosylation reported to date and appears to play a role in protein folding, trafficking and/or stability. Our knowledge of the prevalence of this mo...
ORGANISM(S): Homo sapiens (Human) 
2020-11-16 | PXD018401 | Pride
Lc-ms Glycosylation C-mannosylation 
ProteomicsA suite of tools for the study of tryptophan C-mannosylation - additional point mutants
Tryptophan C-mannosylation is an unusual co-translational protein modification performed by metazoans and apicomplexan parasites. The prevalence of this modification and its biological function is poorly understood, with progress being hampered by a dearth of tools for its study. Here, we engineer o...
ORGANISM(S): Homo sapiens (Human) 
2020-11-16 | PXD021612 | Pride
Glycosylation C-mannosylation 
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