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ProteomicsDNA-Protein Crosslinking Problem in Saccharomyces cerevisiae for methanol utilization
Formaldehyde-induced DNA-protein crosslinkings (DPCs) and large repeated DNA fragments suggest strategies for methanol detoxification and phenotype enhancement
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2026-01-07 | PXD064984 | Pride
Lc-ms Saccharomyces cerevisiae Methanol Dna-protein crosslinking 
ProteomicsDNA-Protein Crosslinking Problem in Saccharomyces cerevisiae for methanol utilization
Formaldehyde-induced DNA-protein crosslinkings (DPCs) and large repeated DNA fragments suggest strategies for methanol detoxification and phenotype enhancement
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2026-01-07 | PXD064258 | Pride
Lc-ms Saccharomyces cerevisiae Methanol Dna-protein crosslinking 
ProteomicsLipid mediated–phase separation of AGO proteins on the ER controls nascent peptide ubiquitination
we sought to determine whether dmAGO1 and Ltn1 share common ubiquitinated nascent peptide targets. For this purpose, we performed the UBA bead-based immunoprecipitation followed by mass spec experiments to identify the ubiquitinated nascent peptide targets of dmAGO1 and Ltn1, respectively. In this a...
ORGANISM(S): Drosophila Melanogaster 
2022-02-18 | PXD031749 |
ProteomicsPhosphoproteome Analysis of Cerebrospinal Fluid Extracellular Vesicles in Primary Central Nervous System Lymphoma
Primary central nervous system lymphoma(PCNSL) is a rare extra-nodal non-Hodgkin’s lymphoma and accounts for 3%-4% of central nervous system tumors. Recent studies have highlighted the importance of cerebrospinal fluid derived extracellular vesicles in PCNSL. Extracellular vesicles(EVs) are nanoscal...
ORGANISM(S): Homo Sapiens (human) 
2023-07-12 | PXD040744 | JPOST Repository
ProteomicsDifferential protein expression in the alveolar bone tissue of rats with apical periodontitis
The iTRAQ method was used to analyze differences in protein expression in alveolar bone tissue during the progression of apical periodontitis in rats.
ORGANISM(S): Rattus Norvegicus 
2025-01-16 | PXD059854 |
MetabolomicsThe Genome of Medicinal Plant Macleaya cordata Provides New Insights into Benzylisoquinoline Alkaloids Metabolism
The overuse of antibiotics in animal agriculture and medicine has caused a series of potential threats to public health. Macleaya cordata is a medicinal plant species from the Papaveraceae family, providing a safe resource for the manufacture of antimicrobial feed additive for livestock. The active ...
2017-04-24 | MTBLS435 | MetaboLights
ProteomicsProteomics of APOE3 and APOE4 BMDMs
The protein expression differences of APOE3 and APOE4 bone marrow-derived macrophages.
ORGANISM(S): Mus Musculus 
2025-01-10 | PXD059706 |
ProteomicsFOXA1 O-GlcNAcylation-mediated transcriptional switch governs metastasis capacity in breast cancer
The forkhead protein FOXA1 has been found to play a critical role in orchestrating hormonal-signaling network and to function as a pioneer factor to regulate breast-specific gene expression,However, whether interplay between O-GlcNAcylation and FOXA1 affects the genome-wide transcriptional activity ...
ORGANISM(S): Homo Sapiens 
2022-12-21 | PXD039019 |
ProteomicsO-GlcNAcylation elevates topoisomerase IIα catalytic activity: a role in the chemotherapy resistance of breast cancer
DNA topoisomerase IIα (TOP2A) plays a vital role in replication and cell division by catalytically altering DNA topology. It is a prominent target for anticancer drugs. However, it is currently unknown whether TOP2A is O-GlcNAc-modified, and the mechanism by which interplay between TOP2A and O-GlcNA...
ORGANISM(S): Homo Sapiens 
2023-03-31 | PXD041284 |
ProteomicsChromatin-associated OGT promotes hepatocellular carcinoma malignancy via activating ZNF263
OGT, the only facilitator which attaches the monosaccharide to many oncogenic factors or tumor suppressors, has been suggested to play an influential role in tumorigenesis and metastasis of HCC. OGT interactome analyses indicates that disordered OGT may serve as a hub protein to activate the buildin...
ORGANISM(S): Homo Sapiens 
2023-01-12 | PXD039365 |
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