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GenomicsFoxa2 and H2A.Z Mediate Nucleosome Depletion during Embryonic Stem Cell Differentiation
We determine the mechanisms that control global nucleosome dynamics during embryonic stem (ES) cell differentiation into endoderm
ORGANISM(S): Mus musculus 
2012-12-24 | E-MTAB-1302 | biostudies-arrayexpress
TranscriptomicsFoxa2 and H2A.Z Mediate Nucleosome Depletion during Embryonic Stem Cell Differentiation - gene expression
We determine the mechanisms that control global nucleosome dynamics during embryonic stem (ES) cell differentiation into endoderm. Three cell types (ES, pEHP, and EHP) were assayed for RNA expression levels.
ORGANISM(S): Mus musculus 
2013-01-24 | E-MTAB-1308 | biostudies-arrayexpress
ProteomicsMS analysis of anti-Senp7 pulldown in adipocytes
To identify the function of Senp7 in adipocytes, we conducted a pulldown aasay and mass spectrometry analysis to identify proteins that interacted with Senp7.
ORGANISM(S): Mus musculus (Mouse) 
2024-06-16 | PXD043479 | Pride
Senp7 Adipocyte 
ProteomicsThe supernatant of the culture medium of adipocytes LC-MSMS
Abdominal aortic aneurysm (AAA) is a life-threatening vascular disease without effective medical therapies. Emerging evidences have suggested a crosstalk between adipose tissue and vascular cells and brown adipose tissue is beneficial for cardiovascular health. Nevertheless, whether brown remodeling...
ORGANISM(S): Mus musculus (Mouse) 
2025-09-07 | PXD064197 | Pride
Mus musculus Supernatant Adipocytes Lc-msms 
UnknownROS-stimulated protein lysine acetylation is required for crown root development in rice.
Not available
S-EPMC10248720 | biostudies-literature
UnknownRegulation of plant immunity through histone H3 β-hydroxybutyrylation-mediated transcriptional control.
Not available
S-EPMC12271380 | biostudies-literature
ProteomicsProteomics of normal and atretic follicles in geese
Follicular atresia is an important factor affecting reproductive performance. In birds, less than 5% of follicles could complete their development process and mature ovulation, while the other 95% become atretic follicles and eventually degraded3. Yangzhou geese are famous for their high egg product...
ORGANISM(S): Anser Canagica 
2021-09-29 | PXD028836 |
ProteomicsProteomic Analysis Muscle and Fat Deposition in Muscovy duck
The liver responsible for 90% lipid synthesis in poultry thus plays important role in the growth of Muscovy duck, which obtains high-fat deposition ability in a time-dependent manner. Therefore, male Muscovy ducks at the age of 14, 28, 42, and 56 days were selected for body weight (BW), carcass weig...
ORGANISM(S): Anas Platyrhynchos 
2021-05-11 | PXD025920 |
ProteomicsProteomics Characteristics Reveal the Risk of T1 Colorectal Cancer Metastasis to Lymph Nodes
The presence of lymph node metastasis (LNM) affects treatment strategy decisions in T1NxM0 colorectal cancer (CRC), but the currently used clinicopathological-based risk stratification cannot be used to accurately predict LNM. In this study, we established a model for predicting LNM and explored the...
ORGANISM(S): Homo Sapiens 
2023-04-12 | PXD041476 |
ProteomicsSIRT5 ameliorates cardiac fibrosis via PCK2 de-succinylation–mediated metabolic reprogramming in cardiac fibroblasts
WT and Sirt5-/- CFBs were stimulated with TGF-β1 (10 ng/mL) for 36 hours. Cells were harvested, snap-frozen, and stored at -80℃. The experiment was independently repeated six times at different time points. Cells from each replicate were pooled to yield more than 3 mg of protein per group. Pooled WT...
ORGANISM(S): Mus Musculus 
2025-11-15 | PXD070811 |
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