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TranscriptomicsReproducibility M-Tram of Enterococcus faecium strain E1162
Two independent aliquots containing approximately 10^7 cells from the transposon mutant of E. faecium E1162 were grown at 37 C for 20 hours in 20 ml of BHI broth. Genomic DNA was isolated from the two replicate cultures and used for the generation of cDNA. The cDNA samples were labeled with Cy3 and ...
ORGANISM(S): Enterococcus faecium 
2012-11-02 | E-MEXP-3502 | biostudies-arrayexpress
ProteomicsGrowth condition-dependent cell surface proteome analysis of Enterococcus faecium
Using a proteolytic shaving approach we identified differentially expressed surface exposed proteins of E. faecium cells after growth in different conditions.
ORGANISM(S): Enterococcus Faecium E1162 (ncbitaxon:535206) 
2015-07-07 | MSV000079184 | MassIVE
TranscriptomicsTranscriptome wt vs mdxR mutant in E. faecium E1162 grown in BHI
Comparative transcriptome analysis of E. faecium E1162 and its isogenic mdxR deletion mutant during growth in BHI in mid-exponential phase (A660 = 0.3)
ORGANISM(S): Enterococcus faecium 
2013-10-09 | E-MEXP-3760 | biostudies-arrayexpress
TranscriptomicsTranscriptome wt vs mdxR mutant in E. faecium E1162 grown in M1 with maltose
Comparative transcriptome analysis of E. faecium E1162 and its isogenic mdxR deletion mutant during growth in M1 with maltose in mid-exponential phase (A660 = 0.3)
ORGANISM(S): Enterococcus faecium 
2013-10-09 | E-MEXP-3759 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis Enterococcus faecium during mid-exponential growth phase in presence and absence of ampicillin
Effect of 20 ug/ml ampicillin on gene expression of Enterococcus faecium E1162 during mid-exponential growth phase
ORGANISM(S): Enterococcus faecium 
2012-03-01 | E-MEXP-3564 | biostudies-arrayexpress
ProteomicsQuantitative label-free proteomic comparison of the omadacycline-induced E. faecium isolates vs initial separation
Quantitative label-free proteomic comparison of the omadacycline-induced E. faecium isolates vs initial separation type.
ORGANISM(S): Enterococcus faecalis (Streptococcus faecalis) 
2022-02-17 | PXD029978 | Pride
Omadacycline E. faecium Label-free proteomic 
ProteomicsFP-biotin enrichment of serine hydrolases in Enterococcus faecium
In our study, we employed activity-based protein profiling (ABPP), a technique that uses specialized inhibitors to identify active serine hydrolases in different strains of E. faecium (clade A1 and A2) and E. lactis under various growth conditions. Serine hydrolases, a large and diverse family of en...
ORGANISM(S): Enterococcus faecium Bacteria 
2024-06-22 | PXD048798 | Pride
Lc-msms Enterococcus faecium Activity-based protein profiling Fp-biotin Serine hydrolases 
ProteomicsE. faecium response of ATP-binding protein activity to human serum and colon organoid extract
Enterococcus faecium has emerged as a major nosocomial and opportunistic pathogen, increasingly associated with severe infections such as urinary tract infections, bacteraemia, and endocarditis. Notably, it exhibits intrinsic resistance to many antibiotics and has a remarkable capacity to acquire ad...
ORGANISM(S): Enterococcus faecium 
2026-09-07 | PXD064189 | Pride
Activity-based protein profiling Desthiobiotin-atp Abc transporters Kinases 
TranscriptomicsMicroarray-based transposon mapping analysis of Enterococcus faecium E1162 that lost biofilm formation ability in a biofilm semi-static model
Mapping of transposon mutant library in Enterococcus faecium during growth in Brain Heart Infusion (BHI) broth and in a semi-static biofilm model. The goal of this study was to identify factors that play a role in E. faecium biofilm formation by selection of transposon insertion mutants that lost th...
ORGANISM(S): Enterococcus faecium 
2016-05-01 | E-MTAB-4524 | biostudies-arrayexpress
ProteomicsProteomic profile of membrane vesicles of E. faecium
Vesicles were derived from 4 different E. faecium strains at 2 different growth conditions (exponential growth phase in nutrient rich medium / stationary growth in nutrient limiting medium). After purification of the vesicles the proteomic profile was obtained.
ORGANISM(S): Enterococcus faecium DO 
2018-06-10 | PXD008801 | Pride
Membrane vesicles E. faecium 
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