Effector triggered immunity

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Unknown (591)
Genomics (94)
Transcriptomics (78)
Proteomics (28)
Metabolomics (1)

Organisms

Arabidopsis thaliana (39)
Schizophyllum commune H4-8 (22)
Mycobacterium tuberculosis SP7 (22)
Oryza sativa Japonica Group (22)
Crotalus durissus terrificus (22)
Eriocheir sinensis (22)
Candidatus Endoriftia persephonae (22)
Mycobacterium tuberculosis SP10 (22)
Mycobacterium tuberculosis SP13 (22)
Cotesia typhae (22)
Mycobacterium tuberculosis SP22 (22)
Mus musculus (18)
Homo sapiens (8)
Solanum lycopersicum (3)
Oryza sativa (3)
Pseudomonas syringae pv. tomato str. DC3000 (2)
Nicotiana tabacum (2)
Mustela putorius furo (1)
Macaca fascicularis (1)
Glycine max (1)
Caenorhabditis elegans (1)
Triticum aestivum (1)
Fraxinus excelsior (1)
Citrus x limon (1)
Xanthomonas vasicola (1)
Nicotiana benthamiana (1)
Vitis vinifera (1)
Oryza sativa Japonica Group (1)
Sorghum bicolor (1)
Brassica rapa (1)

Organisms

Arabidopsis thaliana (25)
Mus musculus (19)
Homo sapiens (8)
Oryza sativa (3)
Pseudomonas syringae pv. tomato str. DC3000 (2)
Solanum lycopersicum (2)
Nicotiana benthamiana (2)
Citrus x limon (1)
Escherichia phage Rao1 (1)
Cucumis melo (1)
Ipomoea batatas (1)
Brassica rapa (1)
Vitis vinifera (1)
Oryza sativa Japonica Group (1)
Nicotiana tabacum (1)

Repository

ENA (89)
geo (52)
biostudies-arrayexpress (31)
pride (22)
iProX (2)
jPOST (1)
MassIVE (1)
MetaboLights (1)
PanoramaPublic (1)
PAXDB (1)

Tissue

Leaf (13)
Plant cell (12)
Intestinal epithelium (1)
Seedling (1)
Root nodule (1)
Root (1)
Rosette (1)
Epithelial cell (1)
T cell (1)
Cell culture (1)

Technology Type

Mass Spectrometry (22)
Affinity purification coupled with mass spectrometry proteomics (9)
Shotgun proteomics (9)
Bottom-up proteomics (8)
Data-dependent acquisition (7)
Gel-based experiment (6)
Mass spectrometry (1)
Affinity proteomics (1)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 2000 (3)
N/C (1)
DNBSEQ-G400 (1)
BGISEQ-500 (1)
Illumina NovaSeq 6000 (1)
Orbitrap Fusion Lumos (1)
5975C Series GC/MSD (Agilent) (1)

Publication Date

2025 (19)
2014 (9)
2024 (9)
2022 (7)
2012 (7)
2023 (7)
2021 (7)
2018 (7)
2009 (6)
2019 (6)
2026 (4)
2020 (4)
2011 (4)
2017 (4)
2016 (3)
2013 (3)
2010 (3)
2008 (1)
2015 (1)

UNIPROT ID/AC

4565.Traes_2AL_0735EE314.1 (1)
W5CSI8_WHEAT (1)
4565.Traes_7DL_5414349CB.1 (1)
4565.Traes_7BL_EDD146B23.2 (1)
A0A3B6IRW5_WHEAT (1)
W5FYY9_WHEAT (1)
A0A3B6E9R0_WHEAT (1)
A0A3B6N2S9_WHEAT (1)
A0A3B5Y2E0_WHEAT (1)
4565.Traes_6AS_631C94232.1 (1)
4565.Traes_5BS_C99F88651.1 (1)
A0A3B6KFL9_WHEAT (1)
A0A3B6C7H6_WHEAT (1)
4565.Traes_3AL_66C8A1BCE.1 (1)
4565.Traes_7AL_E981255F4.1 (1)
4565.Traes_3DL_F79CCAE00.2 (1)
4565.Traes_6DL_92A0F4993.1 (1)
4565.Traes_4AL_37B6568C5.1 (1)
4565.Traes_1BL_6FE4EB955.1 (1)
A0A3B6TWG7_WHEAT (1)
A0A3B6TZE5_WHEAT (1)
4565.Traes_3DS_846AC2A89.1 (1)
4565.Traes_4DL_05FC2A668.1 (1)
4565.Traes_7BS_0FE347D4E.1 (1)
4565.Traes_3DS_1589098D3.1 (1)
A0A3B6MI73_WHEAT (1)
A0A3B6JED0_WHEAT (1)
4565.Traes_1BS_C25C6D1AD.1 (1)
A0A341WW92_WHEAT (1)
A0A3B6PUM5_WHEAT (1)

CHEBI ID

CHEBI:17765 (1)
CHEBI:27469 (1)
CHEBI:82838 (1)
CHEBI:48300 (1)
CHEBI:36632 (1)
CHEBI:8337 (1)
CHEBI:17123 (1)
CHEBI:77131 (1)
CHEBI:17992 (1)
CHEBI:18287 (1)
CHEBI:26984 (1)
CHEBI:33508 (1)
CHEBI:33404 (1)
CHEBI:28757 (1)
CHEBI:37084 (1)
CHEBI:28621 (1)
CHEBI:15728 (1)
CHEBI:16977 (1)
CHEBI:4139 (1)
CHEBI:86348 (1)
CHEBI:28842 (1)
CHEBI:15428 (1)
CHEBI:14336 (1)
CHEBI:16958 (1)
CHEBI:33198 (1)
CHEBI:4167 (1)
CHEBI:16119 (1)
CHEBI:15741 (1)
CHEBI:17268 (1)
CHEBI:30746 (1)

Metabolite Name

Unknown 21, RT(min) = 22.9 (1)
Unknown 20, RT(min) = 19.2 (1)
Unknown 19, RT(min) = 18.7 (1)
Unknown 18, RT(min) = 18.2 (1)
Unknown 17, RT(min) = 17.9 (1)
Unknown 16, RT(min) = 17.8 (1)
Unknown 15, RT(min) = 17.7 (1)
Unknown 14, RT(min) = 17.4 (1)
Unknown 13, RT(min) = 16.8 (1)
Unknown 12, RT(min) = 16.3 (1)
Unknown 11, RT(min) = 16.0 (1)
Unknown 10, RT(min) = 15.8 (1)
Unknown 9, RT(min) = 15.4 (1)
Unknown 8, RT(min) = 15.2 (1)
Unknown 7, RT(min) = 14.3 (1)
Unknown 6, RT(min) = 13.9 (1)
Unknown 5, RT(min) = 13.8 (1)
Unknown 4, RT(min) = 13.0 (1)
Unknown 3, RT(min) = 12.9 (1)
Unknown 2, RT(min) = 11.5 (1)
Unknown 1, RT (min) = 9.4 (1)
Lilioside B (1)
EINECS 208-487-3 (1)
2-ketogluconic acid (1)
3-Glycerophosphate (1)
L-fucose (1)
Xylitol (1)
D-Lyxopyranose (1)
Triethanolamine (1)
D-malic acid (1)

First Public Date

2025 (20)
2026 (15)
2024 (9)
2023 (8)
2022 (7)
2014 (7)
2018 (6)
2021 (4)
2020 (3)
2019 (3)
2015 (3)
2017 (2)
2016 (1)
2013 (1)

Classification

viruses (1)

Study type

Transcription profiling by array (19)
RNA-seq of coding RNA (8)
One-color microarray (1)
Cell line - High-throughput sequencing (1)
ChIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (63)
2025 (56)
2021 (55)
2024 (54)
2020 (51)
2023 (50)
2018 (48)
2019 (43)
2016 (34)
2015 (27)
2017 (25)
2014 (24)
2012 (21)
2013 (19)
2011 (17)
2026 (13)
2010 (12)
2009 (6)
2008 (2)
2006 (1)
2005 (1)

Lab affiliation

Leibniz Institute of Plant Biochemistry, Department Biochemistry of Plant Interactions, Weinberg 3, 06120 Halle (Saale), Germany (5)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (2)
Laboratory of Immunity & Cell Communication, Division BIOCEV, First Faculty of Medicine, Charles University, Vestec, Czech Republic (1)
Swedish University of Agricultural Sciences, Department of Plant Protection Biology (1)
FRAIB, CNRS (1)
Department of Plant Pathology, University of California, Davis (1)
Proteomics group, The Sainsbury Laboratory, Colney lane, Norwich, NR4 7UH, United Kingdom (1)
The Sainsbury Laboratory (1)
Group leader Dept Crop Genetics John Innes Centre Norwich UK (1)
Leibniz Institute of Plant Biochemistry Research Group Head Proteome Biology of Plant Interactions (1)
Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599 USA (1)
Academia Sinica (1)
Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, Interdisciplinary Center for Biotechnology Research, University of Florida, Gainesville, FL, USA (1)
The Institute of Cancer Research, London (1)
University of Warwick (1)
Group leader Dept Crop Genetics John Innes Centre Norwich UK (1)
Institute of Plant and Microbial Biology, Zürich-Basel Plant Science Center, University of Zürich, Zürich, Switzerland (1)

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Expression profiling of Col-0 and rps2 treated with Psm:AvrRpt2

Identification of differential gene expression during RPS2-mediated effector-triggered immunity in Arabidopsis Four-week-old leaves of Arabidopsis Col-0 wild type and rps2 mutant plant were infiltrated with Pseudomonas syringae pv. Maculicola carring effector AvrRpt2 at OD 0.01. Samples were collect...

ORGANISM(S): Arabidopsis thaliana

2016-09-01 | E-GEOD-72742 | biostudies-arrayexpress

Expression analysis of Arabidopsis transgenic plants carrying DEX-inducible MKK4DD in Col or sid2 background treated with DEX or control

Effector-Triggered Immunity (ETI) and Pattern-Triggered Immunity (PTI) are well-defined modes of plant immunity triggered by recognition of pathogen effector proteins and microbe-associated molecular patterns, respectively. While ETI and PTI network extensively share signaling components, the shared...

ORGANISM(S): Arabidopsis thaliana

2014-07-29 | E-GEOD-40547 | biostudies-arrayexpress

Expression analysis of Arabidopsis plants infected with Pseudomonas syringae pv. tomato DC3000 (Pto) strains

ORGANISM(S): Arabidopsis thaliana

2014-07-29 | E-GEOD-40544 | biostudies-arrayexpress

Quantitative phosphoproteomic analysis reveals common regulatory mechanisms of immune components during effector- and PAMP-triggered immunity

The dataset for this project was to identify significantly regulated phosphorylation sites of membrane-associated proteins during RPS2-mediated effector-triggered immunity in Arabidopsis.

ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress)

2018-10-11 | PXD010440 | Pride

Translational Regulation of Metabolic Dynamics during Effector-Triggered Immunity

PRJNA510796 | ENA

Regulatory Mechanisms between Pattern- and Effector-Triggered Immunity in Tomato Leaves Revealed by Integrative Proteomic and Phosphoproteomic Analyses

Plants have evolved a two-layered immune system that mainly includes pattern-triggered immunity (PTI) and effector-triggered immunity (ETI) against pathogen attack. PTI and ETI signaling are functionally linked, but also distinct due to specific perceived ligands and activation modes. Unraveling how...

ORGANISM(S): Solanum lycopersicum

2021-11-25 | PXD028240 | Pride

Eti Pti Tomato Plant immunity Proteomics Pst Phosphorylation

Transcriptome sequencing of tomato leaves treated with different Pst DC3000 mutant strains

We designed an experiment to assess ETI and PTI in RG-PtoR using a series of Pst DC3000 strains which have different mutations that allow dissection of the plant immune response. We collected samples at 6 hai and monitored the development of disease in these plants. Plants infiltrated with DC3000 Δf...

ORGANISM(S): Solanum lycopersicum

2014-11-04 | E-MTAB-4797 | biostudies-arrayexpress

Transcriptome sequencing of leaves of resistant (RG-PtoR) and susceptible (RG-prf3 and RG-prf19) tomato plants treated with Pst DC3000

In order to study the transcriptome changes in tomato during Pto/Prf-mediated ETI, we infiltrated tomato Rio Grande (RG)-PtoR resistant plants (plants that have a functional Pto/Prf signaling pathway, Pto/Pto, Prf/Prf) and two different susceptible plants: RG-prf3 and RG-prf19 (Pto/Pto, prf/prf), wi...

ORGANISM(S): Solanum lycopersicum

2014-11-04 | E-MTAB-4796 | biostudies-arrayexpress

Proteomics of different types of immunity in potato

Plants have a wide variety of ways to defend against pathogens. A commonly used model of the plant immune system divides it into a general response triggered by pathogen associated molecular patterns (PAMPs) and a specific response triggered by effectors. The first type of response is known as PAMP ...

ORGANISM(S): Solanum tuberosum (Potato)

2019-10-17 | PXD012576 | Pride

Potato Immunity Eti Effector triggered immunity Pti Pamp-triggered immunity

KA120 negatively regulates effector-triggered immunity [RNA-seq]

PRJNA616052 | ENA

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